Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
SMIM5Q71RC9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SMIM5Q71RC9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
SMIM5Q71RC9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.19■■□□□ 1.3
SMIM5Q71RC9 AC141586.3-201ENST00000562166 1838 ntBASIC23.19■■□□□ 1.3
SMIM5Q71RC9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMIM5Q71RC9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC23.19■■□□□ 1.3
SMIM5Q71RC9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SMIM5Q71RC9 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SMIM5Q71RC9 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SMIM5Q71RC9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.19■■□□□ 1.3
SMIM5Q71RC9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMIM5Q71RC9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMIM5Q71RC9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.18■■□□□ 1.3
SMIM5Q71RC9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
SMIM5Q71RC9 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMIM5Q71RC9 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC23.18■■□□□ 1.3
SMIM5Q71RC9 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMIM5Q71RC9 AC023274.1-201ENST00000418278 595 ntBASIC23.18■■□□□ 1.3
SMIM5Q71RC9 URGCP-206ENST00000446958 365 ntTSL 2 BASIC23.18■■□□□ 1.3
SMIM5Q71RC9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC23.18■■□□□ 1.3
SMIM5Q71RC9 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC23.18■■□□□ 1.3
SMIM5Q71RC9 COX5A-204ENST00000567270 579 ntTSL 3 BASIC23.18■■□□□ 1.3
SMIM5Q71RC9 Z83851.2-201ENST00000609564 659 ntBASIC23.18■■□□□ 1.3
SMIM5Q71RC9 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SMIM5Q71RC9 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMIM5Q71RC9 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC23.18■■□□□ 1.3
SMIM5Q71RC9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMIM5Q71RC9 HEIH-201ENST00000623091 1652 ntBASIC23.18■■□□□ 1.3
SMIM5Q71RC9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC23.18■■□□□ 1.3
SMIM5Q71RC9 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SMIM5Q71RC9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.18■■□□□ 1.3
SMIM5Q71RC9 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
SMIM5Q71RC9 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMIM5Q71RC9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMIM5Q71RC9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC23.17■■□□□ 1.3
SMIM5Q71RC9 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
SMIM5Q71RC9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC23.17■■□□□ 1.3
SMIM5Q71RC9 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
SMIM5Q71RC9 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMIM5Q71RC9 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
SMIM5Q71RC9 OR7E14P-202ENST00000530490 1290 ntBASIC23.17■■□□□ 1.3
SMIM5Q71RC9 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC23.17■■□□□ 1.3
SMIM5Q71RC9 AL138831.2-201ENST00000606564 490 ntBASIC23.17■■□□□ 1.3
SMIM5Q71RC9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SMIM5Q71RC9 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC23.17■■□□□ 1.3
SMIM5Q71RC9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.17■■□□□ 1.3
SMIM5Q71RC9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
SMIM5Q71RC9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.17■■□□□ 1.3
SMIM5Q71RC9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMIM5Q71RC9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SMIM5Q71RC9 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMIM5Q71RC9 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.16■■□□□ 1.3
SMIM5Q71RC9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
SMIM5Q71RC9 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC23.16■■□□□ 1.3
SMIM5Q71RC9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMIM5Q71RC9 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC23.16■■□□□ 1.3
SMIM5Q71RC9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMIM5Q71RC9 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMIM5Q71RC9 RPS2P28-201ENST00000314255 741 ntBASIC23.16■■□□□ 1.3
SMIM5Q71RC9 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SMIM5Q71RC9 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMIM5Q71RC9 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC23.16■■□□□ 1.3
SMIM5Q71RC9 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC23.16■■□□□ 1.3
SMIM5Q71RC9 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC23.16■■□□□ 1.3
SMIM5Q71RC9 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC23.16■■□□□ 1.3
SMIM5Q71RC9 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC23.16■■□□□ 1.3
SMIM5Q71RC9 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC23.16■■□□□ 1.3
SMIM5Q71RC9 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC23.16■■□□□ 1.3
SMIM5Q71RC9 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
SMIM5Q71RC9 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SMIM5Q71RC9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
SMIM5Q71RC9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SMIM5Q71RC9 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
SMIM5Q71RC9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMIM5Q71RC9 HLA-J-201ENST00000462773 1622 ntBASIC23.15■■□□□ 1.3
SMIM5Q71RC9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMIM5Q71RC9 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC23.15■■□□□ 1.3
SMIM5Q71RC9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SMIM5Q71RC9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC23.15■■□□□ 1.3
SMIM5Q71RC9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMIM5Q71RC9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC23.15■■□□□ 1.3
SMIM5Q71RC9 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMIM5Q71RC9 UNC93B6-202ENST00000528242 690 ntBASIC23.15■■□□□ 1.3
SMIM5Q71RC9 AC009533.2-201ENST00000543664 586 ntBASIC23.15■■□□□ 1.3
SMIM5Q71RC9 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC23.15■■□□□ 1.3
SMIM5Q71RC9 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SMIM5Q71RC9 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC23.15■■□□□ 1.3
SMIM5Q71RC9 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SMIM5Q71RC9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMIM5Q71RC9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMIM5Q71RC9 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC23.15■■□□□ 1.3
SMIM5Q71RC9 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMIM5Q71RC9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC23.15■■□□□ 1.3
SMIM5Q71RC9 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC23.14■■□□□ 1.3
SMIM5Q71RC9 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SMIM5Q71RC9 ABCD1P5-201ENST00000445663 754 ntBASIC23.14■■□□□ 1.29
SMIM5Q71RC9 AC004967.1-201ENST00000453589 447 ntBASIC23.14■■□□□ 1.29
SMIM5Q71RC9 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SMIM5Q71RC9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms