Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HIST2H3AQ71DI3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
HIST2H3AQ71DI3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST2H3AQ71DI3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HIST2H3AQ71DI3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST2H3AQ71DI3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HIST2H3AQ71DI3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.18■□□□□ 0.18
HIST2H3AQ71DI3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.18■□□□□ 0.18
HIST2H3AQ71DI3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST2H3AQ71DI3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST2H3AQ71DI3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HIST2H3AQ71DI3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HIST2H3AQ71DI3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST2H3AQ71DI3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.18■□□□□ 0.18
HIST2H3AQ71DI3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST2H3AQ71DI3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HIST2H3AQ71DI3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST2H3AQ71DI3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.18■□□□□ 0.18
HIST2H3AQ71DI3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST2H3AQ71DI3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST2H3AQ71DI3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST2H3AQ71DI3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.18■□□□□ 0.18
HIST2H3AQ71DI3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 AC005332.8-201ENST00000622750 2735 ntBASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HIST2H3AQ71DI3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 AL163051.1-201ENST00000569214 1512 ntBASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 KRT18P23-201ENST00000435622 1283 ntBASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 AC128688.1-201ENST00000487626 519 ntBASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 AC093827.2-201ENST00000512654 315 ntBASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 NAPSB-206ENST00000562112 1266 ntBASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 AC066615.1-201ENST00000640911 628 ntBASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 AC093677.2-201ENST00000600169 1863 ntBASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIST2H3AQ71DI3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HIST2H3AQ71DI3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms