Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 KRT16P5-201ENST00000455284 522 ntBASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 Z85996.1-201ENST00000494644 937 ntBASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 AC124016.1-201ENST00000609552 612 ntBASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 AC138028.4-201ENST00000564984 1845 ntBASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PTCHD4Q6ZW05 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTCHD4Q6ZW05 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
PTCHD4Q6ZW05 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTCHD4Q6ZW05 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTCHD4Q6ZW05 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTCHD4Q6ZW05 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.96■□□□□ 0.31
PTCHD4Q6ZW05 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.96■□□□□ 0.31
PTCHD4Q6ZW05 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.96■□□□□ 0.31
PTCHD4Q6ZW05 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTCHD4Q6ZW05 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTCHD4Q6ZW05 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.96■□□□□ 0.31
PTCHD4Q6ZW05 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTCHD4Q6ZW05 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.96■□□□□ 0.31
PTCHD4Q6ZW05 AC068587.9-201ENST00000641814 219 ntBASIC16.96■□□□□ 0.31
PTCHD4Q6ZW05 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTCHD4Q6ZW05 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTCHD4Q6ZW05 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTCHD4Q6ZW05 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTCHD4Q6ZW05 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PTCHD4Q6ZW05 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PTCHD4Q6ZW05 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PTCHD4Q6ZW05 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.96■□□□□ 0.3
PTCHD4Q6ZW05 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.96■□□□□ 0.3
PTCHD4Q6ZW05 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
PTCHD4Q6ZW05 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PTCHD4Q6ZW05 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PTCHD4Q6ZW05 AC112777.1-201ENST00000540175 1423 ntBASIC16.96■□□□□ 0.3
PTCHD4Q6ZW05 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
PTCHD4Q6ZW05 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 AC093677.2-201ENST00000600169 1863 ntBASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTCHD4Q6ZW05 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 PRORSD1P-202ENST00000563365 2154 ntBASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
PTCHD4Q6ZW05 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms