Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC27.39■■□□□ 1.98
CCDC141Q6ZP82 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC27.39■■□□□ 1.98
CCDC141Q6ZP82 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC27.39■■□□□ 1.98
CCDC141Q6ZP82 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
CCDC141Q6ZP82 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC27.39■■□□□ 1.98
CCDC141Q6ZP82 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CCDC141Q6ZP82 ADK-206ENST00000541550 2222 ntTSL 2 BASIC27.39■■□□□ 1.98
CCDC141Q6ZP82 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CCDC141Q6ZP82 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CCDC141Q6ZP82 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC27.39■■□□□ 1.98
CCDC141Q6ZP82 AC099343.3-201ENST00000605834 2503 ntBASIC27.39■■□□□ 1.98
CCDC141Q6ZP82 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
CCDC141Q6ZP82 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
CCDC141Q6ZP82 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
CCDC141Q6ZP82 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.97
CCDC141Q6ZP82 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
CCDC141Q6ZP82 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
CCDC141Q6ZP82 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC27.39■■□□□ 1.97
CCDC141Q6ZP82 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 MTDHP3-201ENST00000594186 672 ntBASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 AC093909.1-201ENST00000504731 1122 ntBASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 POLD2P1-201ENST00000511220 997 ntBASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 SART3-203ENST00000546611 1184 ntBASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CCDC141Q6ZP82 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC27.37■■□□□ 1.97
CCDC141Q6ZP82 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC27.37■■□□□ 1.97
CCDC141Q6ZP82 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC27.37■■□□□ 1.97
CCDC141Q6ZP82 LINC01126-201ENST00000623515 1646 ntBASIC27.37■■□□□ 1.97
CCDC141Q6ZP82 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC27.37■■□□□ 1.97
CCDC141Q6ZP82 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
CCDC141Q6ZP82 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CCDC141Q6ZP82 AL499627.1-201ENST00000569373 2188 ntBASIC27.37■■□□□ 1.97
CCDC141Q6ZP82 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
CCDC141Q6ZP82 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC27.37■■□□□ 1.97
CCDC141Q6ZP82 KRT18P65-201ENST00000439811 1286 ntBASIC27.37■■□□□ 1.97
CCDC141Q6ZP82 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC27.37■■□□□ 1.97
CCDC141Q6ZP82 AC145285.3-201ENST00000564603 959 ntBASIC27.37■■□□□ 1.97
CCDC141Q6ZP82 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CCDC141Q6ZP82 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
CCDC141Q6ZP82 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC27.37■■□□□ 1.97
CCDC141Q6ZP82 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC141Q6ZP82 ADM-207ENST00000530439 1839 ntTSL 2 BASIC27.36■■□□□ 1.97
CCDC141Q6ZP82 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC141Q6ZP82 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
CCDC141Q6ZP82 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC141Q6ZP82 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC141Q6ZP82 IGHV3-22-201ENST00000520721 359 ntBASIC27.36■■□□□ 1.97
CCDC141Q6ZP82 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC27.36■■□□□ 1.97
CCDC141Q6ZP82 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC141Q6ZP82 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC27.36■■□□□ 1.97
CCDC141Q6ZP82 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC27.35■■□□□ 1.97
CCDC141Q6ZP82 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC141Q6ZP82 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC27.35■■□□□ 1.97
CCDC141Q6ZP82 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC141Q6ZP82 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC141Q6ZP82 CSF3-203ENST00000394148 622 ntTSL 3 BASIC27.35■■□□□ 1.97
CCDC141Q6ZP82 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC141Q6ZP82 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC27.35■■□□□ 1.97
CCDC141Q6ZP82 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC27.35■■□□□ 1.97
CCDC141Q6ZP82 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC141Q6ZP82 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
CCDC141Q6ZP82 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC141Q6ZP82 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC27.35■■□□□ 1.97
CCDC141Q6ZP82 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC141Q6ZP82 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC141Q6ZP82 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC27.35■■□□□ 1.97
CCDC141Q6ZP82 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC141Q6ZP82 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CCDC141Q6ZP82 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
CCDC141Q6ZP82 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC27.34■■□□□ 1.97
CCDC141Q6ZP82 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC27.34■■□□□ 1.97
CCDC141Q6ZP82 AC021087.4-201ENST00000563761 564 ntBASIC27.34■■□□□ 1.97
CCDC141Q6ZP82 PIN1-206ENST00000587625 878 ntTSL 2 BASIC27.34■■□□□ 1.97
CCDC141Q6ZP82 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC27.34■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms