Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 AC023824.1-201ENST00000562945 2975 ntBASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TMEM88Q6PEY1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 GAS2L1P2-201ENST00000436355 1356 ntBASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TMEM88Q6PEY1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 IRX1P1-201ENST00000438849 1838 ntBASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.88□□□□□ -0.03
TMEM88Q6PEY1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
TMEM88Q6PEY1 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms