Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
HLA-DQA1Q5Y7H0 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 AC011558.1-201ENST00000623459 338 ntBASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQA1Q5Y7H0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 TSPY5P-201ENST00000426936 936 ntBASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 AC104390.1-201ENST00000555663 520 ntBASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 GCSHP2-201ENST00000560971 527 ntBASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 AC093503.3-201ENST00000624917 2352 ntBASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 AC004408.2-201ENST00000623613 2777 ntBASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HLA-DQA1Q5Y7H0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA1Q5Y7H0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA1Q5Y7H0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA1Q5Y7H0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA1Q5Y7H0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HLA-DQA1Q5Y7H0 MYLKP1-201ENST00000509077 1580 ntBASIC17.16■□□□□ 0.34
HLA-DQA1Q5Y7H0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HLA-DQA1Q5Y7H0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA1Q5Y7H0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA1Q5Y7H0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA1Q5Y7H0 AC104076.2-201ENST00000448912 469 ntBASIC17.16■□□□□ 0.34
HLA-DQA1Q5Y7H0 HOMER2P1-201ENST00000455653 964 ntBASIC17.16■□□□□ 0.34
HLA-DQA1Q5Y7H0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.16■□□□□ 0.34
HLA-DQA1Q5Y7H0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA1Q5Y7H0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.16■□□□□ 0.34
HLA-DQA1Q5Y7H0 AL049597.2-201ENST00000565575 961 ntBASIC17.16■□□□□ 0.34
HLA-DQA1Q5Y7H0 AL441883.1-201ENST00000566170 1045 ntBASIC17.16■□□□□ 0.34
HLA-DQA1Q5Y7H0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.16■□□□□ 0.34
HLA-DQA1Q5Y7H0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.16■□□□□ 0.34
HLA-DQA1Q5Y7H0 AC006011.2-201ENST00000621313 1158 ntBASIC17.16■□□□□ 0.34
HLA-DQA1Q5Y7H0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA1Q5Y7H0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA1Q5Y7H0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA1Q5Y7H0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA1Q5Y7H0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.16■□□□□ 0.34
HLA-DQA1Q5Y7H0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA1Q5Y7H0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HLA-DQA1Q5Y7H0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms