Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ALFQ53S48 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ALFQ53S48 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ALFQ53S48 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ALFQ53S48 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.91■□□□□ 0.62
ALFQ53S48 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ALFQ53S48 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.91■□□□□ 0.62
ALFQ53S48 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.91■□□□□ 0.62
ALFQ53S48 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.91■□□□□ 0.62
ALFQ53S48 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.91■□□□□ 0.62
ALFQ53S48 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.91■□□□□ 0.62
ALFQ53S48 ZNF444P1-201ENST00000559497 298 ntBASIC18.91■□□□□ 0.62
ALFQ53S48 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
ALFQ53S48 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.91■□□□□ 0.62
ALFQ53S48 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ALFQ53S48 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ALFQ53S48 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
ALFQ53S48 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ALFQ53S48 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ALFQ53S48 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ALFQ53S48 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ALFQ53S48 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ALFQ53S48 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ALFQ53S48 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ALFQ53S48 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ALFQ53S48 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ALFQ53S48 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ALFQ53S48 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ALFQ53S48 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ALFQ53S48 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ALFQ53S48 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ALFQ53S48 FAM86EP-206ENST00000510506 987 ntBASIC18.9■□□□□ 0.62
ALFQ53S48 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.9■□□□□ 0.62
ALFQ53S48 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.9■□□□□ 0.62
ALFQ53S48 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.9■□□□□ 0.62
ALFQ53S48 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.9■□□□□ 0.62
ALFQ53S48 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.9■□□□□ 0.62
ALFQ53S48 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.9■□□□□ 0.62
ALFQ53S48 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.9■□□□□ 0.62
ALFQ53S48 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ALFQ53S48 AL121956.5-201ENST00000625261 221 ntBASIC18.9■□□□□ 0.62
ALFQ53S48 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ALFQ53S48 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ALFQ53S48 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.9■□□□□ 0.62
ALFQ53S48 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ALFQ53S48 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ALFQ53S48 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.9■□□□□ 0.62
ALFQ53S48 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.9■□□□□ 0.62
ALFQ53S48 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.89■□□□□ 0.62
ALFQ53S48 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.89■□□□□ 0.62
ALFQ53S48 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
ALFQ53S48 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.89■□□□□ 0.62
ALFQ53S48 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.89■□□□□ 0.62
ALFQ53S48 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ALFQ53S48 HCG11-201ENST00000411553 5696 ntBASIC18.89■□□□□ 0.61
ALFQ53S48 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.89■□□□□ 0.61
ALFQ53S48 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.89■□□□□ 0.61
ALFQ53S48 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
ALFQ53S48 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ALFQ53S48 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.89■□□□□ 0.61
ALFQ53S48 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ALFQ53S48 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.89■□□□□ 0.61
ALFQ53S48 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
ALFQ53S48 AC009065.1-201ENST00000564055 1225 ntBASIC18.89■□□□□ 0.61
ALFQ53S48 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ALFQ53S48 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.89■□□□□ 0.61
ALFQ53S48 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ALFQ53S48 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ALFQ53S48 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ALFQ53S48 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ALFQ53S48 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
ALFQ53S48 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.89■□□□□ 0.61
ALFQ53S48 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.89■□□□□ 0.61
ALFQ53S48 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ALFQ53S48 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ALFQ53S48 AC073592.3-201ENST00000625118 1834 ntBASIC18.88■□□□□ 0.61
ALFQ53S48 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ALFQ53S48 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ALFQ53S48 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.88■□□□□ 0.61
ALFQ53S48 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ALFQ53S48 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ALFQ53S48 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.88■□□□□ 0.61
ALFQ53S48 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ALFQ53S48 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ALFQ53S48 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ALFQ53S48 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ALFQ53S48 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
ALFQ53S48 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ALFQ53S48 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ALFQ53S48 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
ALFQ53S48 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.88■□□□□ 0.61
ALFQ53S48 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.88■□□□□ 0.61
ALFQ53S48 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ALFQ53S48 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.88■□□□□ 0.61
ALFQ53S48 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ALFQ53S48 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.88■□□□□ 0.61
ALFQ53S48 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ALFQ53S48 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.88■□□□□ 0.61
ALFQ53S48 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ALFQ53S48 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms