Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ATP13A4Q4VNC1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP13A4Q4VNC1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP13A4Q4VNC1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP13A4Q4VNC1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP13A4Q4VNC1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP13A4Q4VNC1 KRT18P23-201ENST00000435622 1283 ntBASIC19.2■□□□□ 0.66
ATP13A4Q4VNC1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP13A4Q4VNC1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP13A4Q4VNC1 WWOX-216ENST00000569818 525 ntBASIC19.2■□□□□ 0.66
ATP13A4Q4VNC1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP13A4Q4VNC1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP13A4Q4VNC1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP13A4Q4VNC1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP13A4Q4VNC1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP13A4Q4VNC1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.2■□□□□ 0.66
ATP13A4Q4VNC1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
ATP13A4Q4VNC1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATP13A4Q4VNC1 PCDHB18P-201ENST00000524813 2368 ntBASIC19.2■□□□□ 0.66
ATP13A4Q4VNC1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATP13A4Q4VNC1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.2■□□□□ 0.66
ATP13A4Q4VNC1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 AC093827.2-201ENST00000512654 315 ntBASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 AC066615.1-201ENST00000640911 628 ntBASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATP13A4Q4VNC1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.18■□□□□ 0.66
ATP13A4Q4VNC1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP13A4Q4VNC1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP13A4Q4VNC1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP13A4Q4VNC1 HOXB1-202ENST00000577092 1414 ntBASIC19.18■□□□□ 0.66
ATP13A4Q4VNC1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP13A4Q4VNC1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ATP13A4Q4VNC1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP13A4Q4VNC1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP13A4Q4VNC1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
ATP13A4Q4VNC1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.18■□□□□ 0.66
ATP13A4Q4VNC1 MMP23A-201ENST00000234610 1017 ntBASIC19.18■□□□□ 0.66
ATP13A4Q4VNC1 EGLN1P1-201ENST00000531623 762 ntBASIC19.18■□□□□ 0.66
ATP13A4Q4VNC1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP13A4Q4VNC1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP13A4Q4VNC1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP13A4Q4VNC1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ATP13A4Q4VNC1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ATP13A4Q4VNC1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
ATP13A4Q4VNC1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ATP13A4Q4VNC1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.18■□□□□ 0.66
ATP13A4Q4VNC1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 PHGDH-209ENST00000641074 1780 ntBASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 AC008764.6-201ENST00000595909 2069 ntBASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 ECEL1P2-202ENST00000465689 757 ntBASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ATP13A4Q4VNC1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms