Protein–RNA interactions for Protein: Q4V339

CBWD6, COBW domain-containing protein 6, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6Q4V339 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBWD6Q4V339 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBWD6Q4V339 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CBWD6Q4V339 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CBWD6Q4V339 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CBWD6Q4V339 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBWD6Q4V339 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.9■□□□□ 0.78
CBWD6Q4V339 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CBWD6Q4V339 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CBWD6Q4V339 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.9■□□□□ 0.78
CBWD6Q4V339 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.9■□□□□ 0.78
CBWD6Q4V339 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.9■□□□□ 0.78
CBWD6Q4V339 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CBWD6Q4V339 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.9■□□□□ 0.78
CBWD6Q4V339 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CBWD6Q4V339 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CBWD6Q4V339 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
CBWD6Q4V339 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CBWD6Q4V339 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CBWD6Q4V339 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CBWD6Q4V339 AC211429.1-201ENST00000415277 523 ntBASIC19.89■□□□□ 0.77
CBWD6Q4V339 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CBWD6Q4V339 GMCL1P1-201ENST00000463439 1581 ntBASIC19.89■□□□□ 0.77
CBWD6Q4V339 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.89■□□□□ 0.77
CBWD6Q4V339 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CBWD6Q4V339 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CBWD6Q4V339 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CBWD6Q4V339 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CBWD6Q4V339 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CBWD6Q4V339 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CBWD6Q4V339 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.89■□□□□ 0.77
CBWD6Q4V339 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.89■□□□□ 0.77
CBWD6Q4V339 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CBWD6Q4V339 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.88■□□□□ 0.77
CBWD6Q4V339 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CBWD6Q4V339 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CBWD6Q4V339 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CBWD6Q4V339 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.88■□□□□ 0.77
CBWD6Q4V339 PHGDH-209ENST00000641074 1780 ntBASIC19.88■□□□□ 0.77
CBWD6Q4V339 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.88■□□□□ 0.77
CBWD6Q4V339 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CBWD6Q4V339 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.88■□□□□ 0.77
CBWD6Q4V339 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CBWD6Q4V339 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CBWD6Q4V339 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CBWD6Q4V339 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CBWD6Q4V339 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CBWD6Q4V339 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.88■□□□□ 0.77
CBWD6Q4V339 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.88■□□□□ 0.77
CBWD6Q4V339 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CBWD6Q4V339 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.88■□□□□ 0.77
CBWD6Q4V339 MIR3180-4-201ENST00000582223 153 ntBASIC19.88■□□□□ 0.77
CBWD6Q4V339 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
CBWD6Q4V339 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CBWD6Q4V339 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.88■□□□□ 0.77
CBWD6Q4V339 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CBWD6Q4V339 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CBWD6Q4V339 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.88■□□□□ 0.77
CBWD6Q4V339 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CBWD6Q4V339 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CBWD6Q4V339 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CBWD6Q4V339 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CBWD6Q4V339 LINC01126-201ENST00000623515 1646 ntBASIC19.87■□□□□ 0.77
CBWD6Q4V339 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CBWD6Q4V339 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CBWD6Q4V339 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.87■□□□□ 0.77
CBWD6Q4V339 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CBWD6Q4V339 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.87■□□□□ 0.77
CBWD6Q4V339 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CBWD6Q4V339 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CBWD6Q4V339 TERF1P1-201ENST00000311003 1181 ntBASIC19.87■□□□□ 0.77
CBWD6Q4V339 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CBWD6Q4V339 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CBWD6Q4V339 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CBWD6Q4V339 AC113347.1-201ENST00000413321 391 ntBASIC19.87■□□□□ 0.77
CBWD6Q4V339 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CBWD6Q4V339 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CBWD6Q4V339 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CBWD6Q4V339 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CBWD6Q4V339 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CBWD6Q4V339 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CBWD6Q4V339 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CBWD6Q4V339 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CBWD6Q4V339 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CBWD6Q4V339 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CBWD6Q4V339 AIRN-201ENST00000601203 4374 ntBASIC19.87■□□□□ 0.77
CBWD6Q4V339 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.87■□□□□ 0.77
CBWD6Q4V339 REXO1L9P-201ENST00000604264 2108 ntBASIC19.87■□□□□ 0.77
CBWD6Q4V339 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CBWD6Q4V339 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CBWD6Q4V339 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
CBWD6Q4V339 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CBWD6Q4V339 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
CBWD6Q4V339 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CBWD6Q4V339 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CBWD6Q4V339 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.86■□□□□ 0.77
CBWD6Q4V339 AC073508.3-201ENST00000619697 1419 ntBASIC19.86■□□□□ 0.77
CBWD6Q4V339 AC020763.4-201ENST00000623414 4170 ntBASIC19.86■□□□□ 0.77
CBWD6Q4V339 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CBWD6Q4V339 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms