Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
YBX1P67809 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
YBX1P67809 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
YBX1P67809 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
YBX1P67809 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
YBX1P67809 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
YBX1P67809 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
YBX1P67809 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.96■□□□□ 0.47
YBX1P67809 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
YBX1P67809 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.96■□□□□ 0.47
YBX1P67809 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
YBX1P67809 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.96■□□□□ 0.47
YBX1P67809 ATP5G1P1-201ENST00000448724 379 ntBASIC17.96■□□□□ 0.47
YBX1P67809 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.96■□□□□ 0.47
YBX1P67809 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.96■□□□□ 0.47
YBX1P67809 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.96■□□□□ 0.47
YBX1P67809 AC139887.4-201ENST00000607877 719 ntBASIC17.96■□□□□ 0.47
YBX1P67809 AL023973.1-201ENST00000624619 620 ntBASIC17.96■□□□□ 0.47
YBX1P67809 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
YBX1P67809 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
YBX1P67809 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
YBX1P67809 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
YBX1P67809 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
YBX1P67809 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
YBX1P67809 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.96■□□□□ 0.47
YBX1P67809 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
YBX1P67809 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.96■□□□□ 0.47
YBX1P67809 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
YBX1P67809 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
YBX1P67809 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
YBX1P67809 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
YBX1P67809 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
YBX1P67809 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.95■□□□□ 0.46
YBX1P67809 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.95■□□□□ 0.46
YBX1P67809 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
YBX1P67809 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.95■□□□□ 0.46
YBX1P67809 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.95■□□□□ 0.46
YBX1P67809 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.95■□□□□ 0.46
YBX1P67809 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.95■□□□□ 0.46
YBX1P67809 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.95■□□□□ 0.46
YBX1P67809 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
YBX1P67809 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.95■□□□□ 0.46
YBX1P67809 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.95■□□□□ 0.46
YBX1P67809 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
YBX1P67809 AC092865.7-201ENST00000641832 219 ntBASIC17.95■□□□□ 0.46
YBX1P67809 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
YBX1P67809 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
YBX1P67809 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
YBX1P67809 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
YBX1P67809 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
YBX1P67809 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
YBX1P67809 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
YBX1P67809 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
YBX1P67809 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
YBX1P67809 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.94■□□□□ 0.46
YBX1P67809 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.94■□□□□ 0.46
YBX1P67809 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
YBX1P67809 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
YBX1P67809 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
YBX1P67809 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
YBX1P67809 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
YBX1P67809 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.94■□□□□ 0.46
YBX1P67809 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
YBX1P67809 AC073592.3-201ENST00000625118 1834 ntBASIC17.94■□□□□ 0.46
YBX1P67809 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
YBX1P67809 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
YBX1P67809 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
YBX1P67809 TMPOP1-202ENST00000424642 1267 ntBASIC17.94■□□□□ 0.46
YBX1P67809 AC117947.1-201ENST00000427448 529 ntBASIC17.94■□□□□ 0.46
YBX1P67809 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.94■□□□□ 0.46
YBX1P67809 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
YBX1P67809 AC011558.1-201ENST00000623459 338 ntBASIC17.94■□□□□ 0.46
YBX1P67809 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
YBX1P67809 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
YBX1P67809 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
YBX1P67809 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
YBX1P67809 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
YBX1P67809 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
YBX1P67809 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
YBX1P67809 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
YBX1P67809 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
YBX1P67809 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
YBX1P67809 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
YBX1P67809 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
YBX1P67809 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
YBX1P67809 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
YBX1P67809 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
YBX1P67809 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
YBX1P67809 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
YBX1P67809 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
YBX1P67809 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
YBX1P67809 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.93■□□□□ 0.46
YBX1P67809 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
YBX1P67809 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.93■□□□□ 0.46
YBX1P67809 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.93■□□□□ 0.46
YBX1P67809 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
YBX1P67809 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.93■□□□□ 0.46
YBX1P67809 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
YBX1P67809 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.93■□□□□ 0.46
YBX1P67809 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms