Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.63■□□□□ 0.73
CDH8P55286 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CDH8P55286 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.63■□□□□ 0.73
CDH8P55286 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDH8P55286 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CDH8P55286 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CDH8P55286 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
CDH8P55286 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CDH8P55286 HLA-F-220ENST00000434407 884 ntBASIC19.63■□□□□ 0.73
CDH8P55286 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.63■□□□□ 0.73
CDH8P55286 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDH8P55286 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.63■□□□□ 0.73
CDH8P55286 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.63■□□□□ 0.73
CDH8P55286 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.63■□□□□ 0.73
CDH8P55286 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.63■□□□□ 0.73
CDH8P55286 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.63■□□□□ 0.73
CDH8P55286 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH8P55286 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDH8P55286 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH8P55286 AC020763.4-201ENST00000623414 4170 ntBASIC19.63■□□□□ 0.73
CDH8P55286 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.63■□□□□ 0.73
CDH8P55286 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.63■□□□□ 0.73
CDH8P55286 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH8P55286 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH8P55286 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH8P55286 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH8P55286 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH8P55286 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.62■□□□□ 0.73
CDH8P55286 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH8P55286 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH8P55286 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH8P55286 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH8P55286 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH8P55286 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH8P55286 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.62■□□□□ 0.73
CDH8P55286 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH8P55286 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH8P55286 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH8P55286 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDH8P55286 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDH8P55286 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDH8P55286 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.62■□□□□ 0.73
CDH8P55286 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.62■□□□□ 0.73
CDH8P55286 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDH8P55286 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.62■□□□□ 0.73
CDH8P55286 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDH8P55286 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH8P55286 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
CDH8P55286 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH8P55286 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH8P55286 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.62■□□□□ 0.73
CDH8P55286 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH8P55286 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH8P55286 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.61■□□□□ 0.73
CDH8P55286 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH8P55286 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH8P55286 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CDH8P55286 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.61■□□□□ 0.73
CDH8P55286 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH8P55286 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH8P55286 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH8P55286 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH8P55286 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CDH8P55286 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH8P55286 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH8P55286 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDH8P55286 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDH8P55286 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH8P55286 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDH8P55286 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH8P55286 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.61■□□□□ 0.73
CDH8P55286 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.61■□□□□ 0.73
CDH8P55286 ZNF444P1-201ENST00000559497 298 ntBASIC19.61■□□□□ 0.73
CDH8P55286 AC009065.1-201ENST00000564055 1225 ntBASIC19.61■□□□□ 0.73
CDH8P55286 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.61■□□□□ 0.73
CDH8P55286 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.61■□□□□ 0.73
CDH8P55286 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CDH8P55286 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.61■□□□□ 0.73
CDH8P55286 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CDH8P55286 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH8P55286 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.61■□□□□ 0.73
CDH8P55286 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH8P55286 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CDH8P55286 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDH8P55286 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.6■□□□□ 0.73
CDH8P55286 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.6■□□□□ 0.73
CDH8P55286 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH8P55286 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH8P55286 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH8P55286 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CDH8P55286 FAM86EP-206ENST00000510506 987 ntBASIC19.6■□□□□ 0.73
CDH8P55286 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.6■□□□□ 0.73
CDH8P55286 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.6■□□□□ 0.73
CDH8P55286 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.6■□□□□ 0.73
CDH8P55286 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.6■□□□□ 0.73
CDH8P55286 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CDH8P55286 LINC01126-201ENST00000623515 1646 ntBASIC19.6■□□□□ 0.73
CDH8P55286 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDH8P55286 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDH8P55286 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms