Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EPHB4P54760 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EPHB4P54760 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EPHB4P54760 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EPHB4P54760 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.67■□□□□ 0.9
EPHB4P54760 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
EPHB4P54760 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EPHB4P54760 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
EPHB4P54760 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
EPHB4P54760 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.66■□□□□ 0.9
EPHB4P54760 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.66■□□□□ 0.9
EPHB4P54760 AL391807.1-203ENST00000604392 2365 ntBASIC20.66■□□□□ 0.9
EPHB4P54760 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
EPHB4P54760 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EPHB4P54760 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EPHB4P54760 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.66■□□□□ 0.9
EPHB4P54760 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EPHB4P54760 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EPHB4P54760 KRT18P13-201ENST00000400056 1290 ntBASIC20.66■□□□□ 0.9
EPHB4P54760 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EPHB4P54760 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.66■□□□□ 0.9
EPHB4P54760 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.66■□□□□ 0.9
EPHB4P54760 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.66■□□□□ 0.9
EPHB4P54760 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.66■□□□□ 0.9
EPHB4P54760 AL136038.4-201ENST00000603606 1261 ntBASIC20.66■□□□□ 0.9
EPHB4P54760 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EPHB4P54760 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EPHB4P54760 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EPHB4P54760 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
EPHB4P54760 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EPHB4P54760 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EPHB4P54760 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
EPHB4P54760 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EPHB4P54760 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EPHB4P54760 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EPHB4P54760 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
EPHB4P54760 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EPHB4P54760 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EPHB4P54760 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
EPHB4P54760 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EPHB4P54760 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EPHB4P54760 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EPHB4P54760 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EPHB4P54760 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
EPHB4P54760 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EPHB4P54760 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.65■□□□□ 0.9
EPHB4P54760 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
EPHB4P54760 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EPHB4P54760 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.65■□□□□ 0.9
EPHB4P54760 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EPHB4P54760 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EPHB4P54760 AKR1C7P-201ENST00000305623 895 ntBASIC20.65■□□□□ 0.9
EPHB4P54760 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
EPHB4P54760 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.65■□□□□ 0.9
EPHB4P54760 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.65■□□□□ 0.9
EPHB4P54760 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
EPHB4P54760 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
EPHB4P54760 AL353801.3-201ENST00000609898 542 ntBASIC20.65■□□□□ 0.9
EPHB4P54760 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
EPHB4P54760 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
EPHB4P54760 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
EPHB4P54760 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EPHB4P54760 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
EPHB4P54760 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.65■□□□□ 0.9
EPHB4P54760 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
EPHB4P54760 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.65■□□□□ 0.9
EPHB4P54760 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.65■□□□□ 0.9
EPHB4P54760 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
EPHB4P54760 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
EPHB4P54760 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.64■□□□□ 0.9
EPHB4P54760 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
EPHB4P54760 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
EPHB4P54760 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
EPHB4P54760 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.64■□□□□ 0.9
EPHB4P54760 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
EPHB4P54760 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
EPHB4P54760 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
EPHB4P54760 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EPHB4P54760 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EPHB4P54760 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EPHB4P54760 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
EPHB4P54760 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.64■□□□□ 0.89
EPHB4P54760 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
EPHB4P54760 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
EPHB4P54760 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.64■□□□□ 0.89
EPHB4P54760 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.64■□□□□ 0.89
EPHB4P54760 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EPHB4P54760 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.64■□□□□ 0.89
EPHB4P54760 AC117500.6-201ENST00000624871 588 ntBASIC20.64■□□□□ 0.89
EPHB4P54760 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.64■□□□□ 0.89
EPHB4P54760 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
EPHB4P54760 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.64■□□□□ 0.89
EPHB4P54760 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
EPHB4P54760 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
EPHB4P54760 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EPHB4P54760 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.64■□□□□ 0.89
EPHB4P54760 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
EPHB4P54760 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.64■□□□□ 0.89
EPHB4P54760 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
EPHB4P54760 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms