Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.04■□□□□ 0.48
CLCNKAP51800 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.04■□□□□ 0.48
CLCNKAP51800 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.04■□□□□ 0.48
CLCNKAP51800 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.04■□□□□ 0.48
CLCNKAP51800 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCNKAP51800 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
CLCNKAP51800 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCNKAP51800 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CLCNKAP51800 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCNKAP51800 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCNKAP51800 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CLCNKAP51800 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCNKAP51800 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCNKAP51800 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.03■□□□□ 0.48
CLCNKAP51800 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.03■□□□□ 0.48
CLCNKAP51800 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCNKAP51800 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCNKAP51800 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.03■□□□□ 0.48
CLCNKAP51800 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCNKAP51800 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCNKAP51800 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCNKAP51800 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.03■□□□□ 0.48
CLCNKAP51800 MIR149-201ENST00000384879 89 ntBASIC18.03■□□□□ 0.48
CLCNKAP51800 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.03■□□□□ 0.48
CLCNKAP51800 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLCNKAP51800 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.03■□□□□ 0.48
CLCNKAP51800 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCNKAP51800 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.03■□□□□ 0.48
CLCNKAP51800 AL162741.1-201ENST00000565563 1558 ntBASIC18.03■□□□□ 0.48
CLCNKAP51800 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCNKAP51800 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCNKAP51800 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLCNKAP51800 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCNKAP51800 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCNKAP51800 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.03■□□□□ 0.48
CLCNKAP51800 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCNKAP51800 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CLCNKAP51800 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCNKAP51800 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLCNKAP51800 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.02■□□□□ 0.48
CLCNKAP51800 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCNKAP51800 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CLCNKAP51800 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCNKAP51800 KRT89P-201ENST00000620027 1478 ntBASIC18.02■□□□□ 0.48
CLCNKAP51800 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.02■□□□□ 0.48
CLCNKAP51800 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.02■□□□□ 0.48
CLCNKAP51800 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCNKAP51800 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCNKAP51800 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.02■□□□□ 0.48
CLCNKAP51800 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCNKAP51800 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCNKAP51800 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
CLCNKAP51800 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCNKAP51800 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CLCNKAP51800 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLCNKAP51800 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CLCNKAP51800 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.02■□□□□ 0.48
CLCNKAP51800 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.02■□□□□ 0.48
CLCNKAP51800 TNXA-203ENST00000507684 2038 ntBASIC18.02■□□□□ 0.48
CLCNKAP51800 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.02■□□□□ 0.48
CLCNKAP51800 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.02■□□□□ 0.48
CLCNKAP51800 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.02■□□□□ 0.48
CLCNKAP51800 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.02■□□□□ 0.48
CLCNKAP51800 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCNKAP51800 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CLCNKAP51800 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CLCNKAP51800 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CLCNKAP51800 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.02■□□□□ 0.48
CLCNKAP51800 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.02■□□□□ 0.48
CLCNKAP51800 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.02■□□□□ 0.48
CLCNKAP51800 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCNKAP51800 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.02■□□□□ 0.48
CLCNKAP51800 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLCNKAP51800 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CLCNKAP51800 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CLCNKAP51800 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
CLCNKAP51800 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLCNKAP51800 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.02■□□□□ 0.47
CLCNKAP51800 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKAP51800 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKAP51800 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKAP51800 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCNKAP51800 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCNKAP51800 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CLCNKAP51800 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKAP51800 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKAP51800 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKAP51800 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCNKAP51800 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CLCNKAP51800 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.01■□□□□ 0.47
CLCNKAP51800 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKAP51800 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKAP51800 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKAP51800 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.01■□□□□ 0.47
CLCNKAP51800 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.01■□□□□ 0.47
CLCNKAP51800 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKAP51800 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKAP51800 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKAP51800 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCNKAP51800 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms