Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CSNK1A1P48729 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.4■□□□□ 0.22
CSNK1A1P48729 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1A1P48729 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1A1P48729 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1A1P48729 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
CSNK1A1P48729 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1A1P48729 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.4■□□□□ 0.22
CSNK1A1P48729 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1A1P48729 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.4■□□□□ 0.22
CSNK1A1P48729 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CSNK1A1P48729 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CSNK1A1P48729 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.39■□□□□ 0.21
CSNK1A1P48729 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1A1P48729 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.39■□□□□ 0.21
CSNK1A1P48729 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1A1P48729 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1A1P48729 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.39■□□□□ 0.21
CSNK1A1P48729 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1A1P48729 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1A1P48729 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.39■□□□□ 0.21
CSNK1A1P48729 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CSNK1A1P48729 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.39■□□□□ 0.21
CSNK1A1P48729 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.39■□□□□ 0.21
CSNK1A1P48729 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.39■□□□□ 0.21
CSNK1A1P48729 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.39■□□□□ 0.21
CSNK1A1P48729 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.39■□□□□ 0.21
CSNK1A1P48729 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1A1P48729 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.39■□□□□ 0.21
CSNK1A1P48729 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.39■□□□□ 0.21
CSNK1A1P48729 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.39■□□□□ 0.21
CSNK1A1P48729 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1A1P48729 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1A1P48729 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1A1P48729 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CSNK1A1P48729 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1A1P48729 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
CSNK1A1P48729 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CSNK1A1P48729 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CSNK1A1P48729 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CSNK1A1P48729 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CSNK1A1P48729 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CSNK1A1P48729 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CSNK1A1P48729 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CSNK1A1P48729 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSNK1A1P48729 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSNK1A1P48729 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSNK1A1P48729 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSNK1A1P48729 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CSNK1A1P48729 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CSNK1A1P48729 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSNK1A1P48729 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.38■□□□□ 0.21
CSNK1A1P48729 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CSNK1A1P48729 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSNK1A1P48729 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSNK1A1P48729 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.38■□□□□ 0.21
CSNK1A1P48729 AP000523.1-201ENST00000398242 1049 ntBASIC16.38■□□□□ 0.21
CSNK1A1P48729 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSNK1A1P48729 ECEL1P3-201ENST00000427961 737 ntBASIC16.38■□□□□ 0.21
CSNK1A1P48729 LIN28AP1-201ENST00000429574 405 ntBASIC16.38■□□□□ 0.21
CSNK1A1P48729 SLC25A3P1-201ENST00000443844 931 ntBASIC16.38■□□□□ 0.21
CSNK1A1P48729 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.38■□□□□ 0.21
CSNK1A1P48729 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.38■□□□□ 0.21
CSNK1A1P48729 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.38■□□□□ 0.21
CSNK1A1P48729 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.38■□□□□ 0.21
CSNK1A1P48729 AC009065.1-201ENST00000564055 1225 ntBASIC16.38■□□□□ 0.21
CSNK1A1P48729 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.38■□□□□ 0.21
CSNK1A1P48729 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSNK1A1P48729 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
CSNK1A1P48729 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CSNK1A1P48729 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSNK1A1P48729 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.38■□□□□ 0.21
CSNK1A1P48729 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.38■□□□□ 0.21
CSNK1A1P48729 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.38■□□□□ 0.21
CSNK1A1P48729 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.38■□□□□ 0.21
CSNK1A1P48729 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CSNK1A1P48729 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSNK1A1P48729 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CSNK1A1P48729 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.38■□□□□ 0.21
CSNK1A1P48729 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.38■□□□□ 0.21
CSNK1A1P48729 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSNK1A1P48729 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.38■□□□□ 0.21
CSNK1A1P48729 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSNK1A1P48729 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
CSNK1A1P48729 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CSNK1A1P48729 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.37■□□□□ 0.21
CSNK1A1P48729 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CSNK1A1P48729 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CSNK1A1P48729 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.37■□□□□ 0.21
CSNK1A1P48729 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CSNK1A1P48729 NEFHP1-201ENST00000412845 2629 ntBASIC16.37■□□□□ 0.21
CSNK1A1P48729 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CSNK1A1P48729 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CSNK1A1P48729 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSNK1A1P48729 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSNK1A1P48729 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.37■□□□□ 0.21
CSNK1A1P48729 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.37■□□□□ 0.21
CSNK1A1P48729 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CSNK1A1P48729 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CSNK1A1P48729 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms