Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT9P35527 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
KRT9P35527 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT9P35527 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT9P35527 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT9P35527 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT9P35527 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
KRT9P35527 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT9P35527 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT9P35527 RCC2P3-201ENST00000418112 1537 ntBASIC20.17■□□□□ 0.82
KRT9P35527 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT9P35527 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT9P35527 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRT9P35527 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
KRT9P35527 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT9P35527 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRT9P35527 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRT9P35527 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.17■□□□□ 0.82
KRT9P35527 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.17■□□□□ 0.82
KRT9P35527 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
KRT9P35527 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT9P35527 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT9P35527 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT9P35527 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.17■□□□□ 0.82
KRT9P35527 MESTP1-201ENST00000404287 994 ntBASIC20.17■□□□□ 0.82
KRT9P35527 AL355355.2-201ENST00000442321 338 ntBASIC20.17■□□□□ 0.82
KRT9P35527 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
KRT9P35527 AC008550.1-201ENST00000511500 884 ntBASIC20.17■□□□□ 0.82
KRT9P35527 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.17■□□□□ 0.82
KRT9P35527 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
KRT9P35527 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
KRT9P35527 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRT9P35527 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.17■□□□□ 0.82
KRT9P35527 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.17■□□□□ 0.82
KRT9P35527 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT9P35527 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.17■□□□□ 0.82
KRT9P35527 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT9P35527 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT9P35527 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRT9P35527 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRT9P35527 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KRT9P35527 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT9P35527 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT9P35527 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.16■□□□□ 0.82
KRT9P35527 AC138028.4-201ENST00000564984 1845 ntBASIC20.16■□□□□ 0.82
KRT9P35527 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
KRT9P35527 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.16■□□□□ 0.82
KRT9P35527 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.16■□□□□ 0.82
KRT9P35527 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT9P35527 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
KRT9P35527 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KRT9P35527 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT9P35527 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
KRT9P35527 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.16■□□□□ 0.82
KRT9P35527 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT9P35527 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT9P35527 CKBP1-201ENST00000565489 1086 ntBASIC20.16■□□□□ 0.82
KRT9P35527 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.16■□□□□ 0.82
KRT9P35527 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT9P35527 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT9P35527 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT9P35527 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT9P35527 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT9P35527 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT9P35527 MYLKP1-201ENST00000509077 1580 ntBASIC20.16■□□□□ 0.82
KRT9P35527 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.16■□□□□ 0.82
KRT9P35527 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT9P35527 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
KRT9P35527 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
KRT9P35527 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT9P35527 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRT9P35527 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.16■□□□□ 0.82
KRT9P35527 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.16■□□□□ 0.82
KRT9P35527 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KRT9P35527 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.15■□□□□ 0.82
KRT9P35527 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT9P35527 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.15■□□□□ 0.82
KRT9P35527 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT9P35527 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
KRT9P35527 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
KRT9P35527 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
KRT9P35527 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT9P35527 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
KRT9P35527 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.15■□□□□ 0.82
KRT9P35527 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.15■□□□□ 0.82
KRT9P35527 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
KRT9P35527 AC116562.2-201ENST00000507042 360 ntBASIC20.15■□□□□ 0.82
KRT9P35527 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.15■□□□□ 0.82
KRT9P35527 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.15■□□□□ 0.82
KRT9P35527 AP000692.2-201ENST00000608391 879 ntBASIC20.15■□□□□ 0.82
KRT9P35527 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
KRT9P35527 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
KRT9P35527 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT9P35527 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRT9P35527 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.15■□□□□ 0.82
KRT9P35527 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
KRT9P35527 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.15■□□□□ 0.82
KRT9P35527 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
KRT9P35527 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
KRT9P35527 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms