Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AL121672.3-201ENST00000608644 468 ntBASIC18.87■□□□□ 0.61
SLC6A4P31645 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.87■□□□□ 0.61
SLC6A4P31645 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SLC6A4P31645 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.87■□□□□ 0.61
SLC6A4P31645 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.87■□□□□ 0.61
SLC6A4P31645 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SLC6A4P31645 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC6A4P31645 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SLC6A4P31645 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A4P31645 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A4P31645 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
SLC6A4P31645 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A4P31645 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC6A4P31645 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A4P31645 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC6A4P31645 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A4P31645 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A4P31645 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A4P31645 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A4P31645 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A4P31645 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SLC6A4P31645 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A4P31645 TSSC2-201ENST00000450217 709 ntBASIC18.86■□□□□ 0.61
SLC6A4P31645 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC6A4P31645 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC6A4P31645 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.86■□□□□ 0.61
SLC6A4P31645 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.86■□□□□ 0.61
SLC6A4P31645 GPR32P1-201ENST00000601788 811 ntBASIC18.86■□□□□ 0.61
SLC6A4P31645 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SLC6A4P31645 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC6A4P31645 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A4P31645 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A4P31645 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A4P31645 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A4P31645 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A4P31645 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC6A4P31645 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SLC6A4P31645 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.86■□□□□ 0.61
SLC6A4P31645 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
SLC6A4P31645 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC6A4P31645 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SLC6A4P31645 LINC01126-201ENST00000623515 1646 ntBASIC18.85■□□□□ 0.61
SLC6A4P31645 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLC6A4P31645 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC6A4P31645 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLC6A4P31645 KRT89P-201ENST00000620027 1478 ntBASIC18.85■□□□□ 0.61
SLC6A4P31645 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SLC6A4P31645 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLC6A4P31645 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC6A4P31645 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.85■□□□□ 0.61
SLC6A4P31645 ATP5G2P1-201ENST00000433580 426 ntBASIC18.85■□□□□ 0.61
SLC6A4P31645 AP002383.4-201ENST00000442518 975 ntBASIC18.85■□□□□ 0.61
SLC6A4P31645 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC6A4P31645 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC6A4P31645 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.85■□□□□ 0.61
SLC6A4P31645 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC6A4P31645 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC6A4P31645 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.85■□□□□ 0.61
SLC6A4P31645 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.85■□□□□ 0.61
SLC6A4P31645 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC6A4P31645 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC6A4P31645 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC6A4P31645 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC6A4P31645 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLC6A4P31645 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLC6A4P31645 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC6A4P31645 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC6A4P31645 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
SLC6A4P31645 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.85■□□□□ 0.61
SLC6A4P31645 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC6A4P31645 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC6A4P31645 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SLC6A4P31645 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC6A4P31645 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC6A4P31645 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC6A4P31645 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC6A4P31645 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC6A4P31645 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SLC6A4P31645 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
SLC6A4P31645 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC6A4P31645 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC6A4P31645 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC6A4P31645 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC6A4P31645 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.84■□□□□ 0.61
SLC6A4P31645 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC6A4P31645 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.84■□□□□ 0.61
SLC6A4P31645 AC092119.3-201ENST00000612618 583 ntBASIC18.84■□□□□ 0.61
SLC6A4P31645 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.84■□□□□ 0.61
SLC6A4P31645 AC004408.2-201ENST00000623613 2777 ntBASIC18.84■□□□□ 0.61
SLC6A4P31645 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC6A4P31645 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC6A4P31645 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC6A4P31645 WIZP1-201ENST00000531444 2299 ntBASIC18.84■□□□□ 0.61
SLC6A4P31645 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC6A4P31645 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC6A4P31645 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.84■□□□□ 0.61
SLC6A4P31645 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.84■□□□□ 0.61
SLC6A4P31645 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SLC6A4P31645 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.83■□□□□ 0.61
SLC6A4P31645 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms