Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 GPR32P1-201ENST00000601788 811 ntBASIC15.87■□□□□ 0.13
CD40P25942 AL390719.2-201ENST00000606993 987 ntBASIC15.87■□□□□ 0.13
CD40P25942 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.87■□□□□ 0.13
CD40P25942 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.87■□□□□ 0.13
CD40P25942 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.87■□□□□ 0.13
CD40P25942 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD40P25942 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CD40P25942 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.87■□□□□ 0.13
CD40P25942 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD40P25942 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CD40P25942 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
CD40P25942 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD40P25942 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD40P25942 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD40P25942 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD40P25942 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CD40P25942 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD40P25942 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.86■□□□□ 0.13
CD40P25942 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD40P25942 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD40P25942 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD40P25942 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD40P25942 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD40P25942 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD40P25942 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD40P25942 KRT89P-201ENST00000620027 1478 ntBASIC15.86■□□□□ 0.13
CD40P25942 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.86■□□□□ 0.13
CD40P25942 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CD40P25942 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.86■□□□□ 0.13
CD40P25942 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.86■□□□□ 0.13
CD40P25942 IGHGP-201ENST00000390555 1178 ntBASIC15.86■□□□□ 0.13
CD40P25942 AP002383.4-201ENST00000442518 975 ntBASIC15.86■□□□□ 0.13
CD40P25942 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.86■□□□□ 0.13
CD40P25942 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.86■□□□□ 0.13
CD40P25942 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.86■□□□□ 0.13
CD40P25942 AP002414.4-201ENST00000589764 1148 ntBASIC15.86■□□□□ 0.13
CD40P25942 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.86■□□□□ 0.13
CD40P25942 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.86■□□□□ 0.13
CD40P25942 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CD40P25942 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CD40P25942 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CD40P25942 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD40P25942 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD40P25942 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD40P25942 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
CD40P25942 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD40P25942 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD40P25942 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD40P25942 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD40P25942 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD40P25942 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.86■□□□□ 0.13
CD40P25942 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD40P25942 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD40P25942 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD40P25942 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.85■□□□□ 0.13
CD40P25942 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD40P25942 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD40P25942 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
CD40P25942 AL499627.1-201ENST00000569373 2188 ntBASIC15.85■□□□□ 0.13
CD40P25942 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD40P25942 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD40P25942 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD40P25942 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD40P25942 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD40P25942 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CD40P25942 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.85■□□□□ 0.13
CD40P25942 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.85■□□□□ 0.13
CD40P25942 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.85■□□□□ 0.13
CD40P25942 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
CD40P25942 MIR3180-1-201ENST00000580374 94 ntBASIC15.85■□□□□ 0.13
CD40P25942 MIR3180-3-201ENST00000584616 94 ntBASIC15.85■□□□□ 0.13
CD40P25942 CLEC4GP1-201ENST00000596555 870 ntBASIC15.85■□□□□ 0.13
CD40P25942 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.85■□□□□ 0.13
CD40P25942 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.85■□□□□ 0.13
CD40P25942 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.85■□□□□ 0.13
CD40P25942 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CD40P25942 KRT18P1-202ENST00000452408 1331 ntBASIC15.85■□□□□ 0.13
CD40P25942 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CD40P25942 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD40P25942 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
CD40P25942 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CD40P25942 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD40P25942 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.85■□□□□ 0.13
CD40P25942 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD40P25942 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.84■□□□□ 0.13
CD40P25942 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD40P25942 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.84■□□□□ 0.13
CD40P25942 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.84■□□□□ 0.13
CD40P25942 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.84■□□□□ 0.13
CD40P25942 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CD40P25942 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD40P25942 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD40P25942 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD40P25942 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CD40P25942 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CD40P25942 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.84■□□□□ 0.13
CD40P25942 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.84■□□□□ 0.13
CD40P25942 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CD40P25942 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.84■□□□□ 0.13
CD40P25942 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms