Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.12■□□□□ 0.33
NR4A1P22736 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.12■□□□□ 0.33
NR4A1P22736 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.12■□□□□ 0.33
NR4A1P22736 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.12■□□□□ 0.33
NR4A1P22736 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.12■□□□□ 0.33
NR4A1P22736 AL359736.2-201ENST00000621992 437 ntBASIC17.12■□□□□ 0.33
NR4A1P22736 SDHAP1-207ENST00000440850 2000 ntBASIC17.12■□□□□ 0.33
NR4A1P22736 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NR4A1P22736 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.12■□□□□ 0.33
NR4A1P22736 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.12■□□□□ 0.33
NR4A1P22736 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NR4A1P22736 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NR4A1P22736 AC046158.3-201ENST00000624947 2558 ntBASIC17.12■□□□□ 0.33
NR4A1P22736 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NR4A1P22736 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NR4A1P22736 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NR4A1P22736 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NR4A1P22736 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NR4A1P22736 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.12■□□□□ 0.33
NR4A1P22736 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR4A1P22736 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR4A1P22736 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR4A1P22736 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.11■□□□□ 0.33
NR4A1P22736 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR4A1P22736 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NR4A1P22736 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR4A1P22736 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR4A1P22736 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR4A1P22736 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.11■□□□□ 0.33
NR4A1P22736 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
NR4A1P22736 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
NR4A1P22736 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NR4A1P22736 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NR4A1P22736 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR4A1P22736 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.11■□□□□ 0.33
NR4A1P22736 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR4A1P22736 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NR4A1P22736 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.11■□□□□ 0.33
NR4A1P22736 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.11■□□□□ 0.33
NR4A1P22736 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.11■□□□□ 0.33
NR4A1P22736 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.11■□□□□ 0.33
NR4A1P22736 AL023875.1-201ENST00000640777 796 ntBASIC17.11■□□□□ 0.33
NR4A1P22736 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NR4A1P22736 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR4A1P22736 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
NR4A1P22736 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR4A1P22736 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR4A1P22736 GNAS-203ENST00000306120 1878 ntBASIC17.11■□□□□ 0.33
NR4A1P22736 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR4A1P22736 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR4A1P22736 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR4A1P22736 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NR4A1P22736 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR4A1P22736 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.11■□□□□ 0.33
NR4A1P22736 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR4A1P22736 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR4A1P22736 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR4A1P22736 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NR4A1P22736 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NR4A1P22736 AC012317.2-201ENST00000623305 2251 ntBASIC17.1■□□□□ 0.33
NR4A1P22736 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NR4A1P22736 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NR4A1P22736 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NR4A1P22736 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NR4A1P22736 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NR4A1P22736 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NR4A1P22736 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NR4A1P22736 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.1■□□□□ 0.33
NR4A1P22736 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NR4A1P22736 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NR4A1P22736 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NR4A1P22736 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NR4A1P22736 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.1■□□□□ 0.33
NR4A1P22736 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NR4A1P22736 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NR4A1P22736 AC239809.2-201ENST00000415381 517 ntBASIC17.1■□□□□ 0.33
NR4A1P22736 AC133681.1-201ENST00000465482 601 ntBASIC17.1■□□□□ 0.33
NR4A1P22736 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NR4A1P22736 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.1■□□□□ 0.33
NR4A1P22736 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
NR4A1P22736 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.1■□□□□ 0.33
NR4A1P22736 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.1■□□□□ 0.33
NR4A1P22736 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.1■□□□□ 0.33
NR4A1P22736 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NR4A1P22736 FAM197Y4-202ENST00000622692 608 ntBASIC17.1■□□□□ 0.33
NR4A1P22736 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NR4A1P22736 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NR4A1P22736 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NR4A1P22736 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NR4A1P22736 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
NR4A1P22736 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NR4A1P22736 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NR4A1P22736 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NR4A1P22736 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NR4A1P22736 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NR4A1P22736 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NR4A1P22736 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.1■□□□□ 0.33
NR4A1P22736 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NR4A1P22736 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NR4A1P22736 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms