Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CAPN3P20807 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.76■□□□□ 0.43
CAPN3P20807 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CAPN3P20807 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.76■□□□□ 0.43
CAPN3P20807 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
CAPN3P20807 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CAPN3P20807 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.76■□□□□ 0.43
CAPN3P20807 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.76■□□□□ 0.43
CAPN3P20807 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CAPN3P20807 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.76■□□□□ 0.43
CAPN3P20807 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.76■□□□□ 0.43
CAPN3P20807 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.76■□□□□ 0.43
CAPN3P20807 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN3P20807 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN3P20807 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.75■□□□□ 0.43
CAPN3P20807 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN3P20807 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CAPN3P20807 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CAPN3P20807 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN3P20807 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN3P20807 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN3P20807 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN3P20807 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN3P20807 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.75■□□□□ 0.43
CAPN3P20807 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN3P20807 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN3P20807 AC239809.2-201ENST00000415381 517 ntBASIC17.75■□□□□ 0.43
CAPN3P20807 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN3P20807 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.75■□□□□ 0.43
CAPN3P20807 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.75■□□□□ 0.43
CAPN3P20807 RARRES2P10-201ENST00000564312 460 ntBASIC17.75■□□□□ 0.43
CAPN3P20807 AL049597.2-201ENST00000565575 961 ntBASIC17.75■□□□□ 0.43
CAPN3P20807 AL445675.2-201ENST00000620291 557 ntBASIC17.75■□□□□ 0.43
CAPN3P20807 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN3P20807 RCC2P3-201ENST00000418112 1537 ntBASIC17.75■□□□□ 0.43
CAPN3P20807 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN3P20807 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CAPN3P20807 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN3P20807 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.75■□□□□ 0.43
CAPN3P20807 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CAPN3P20807 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CAPN3P20807 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.75■□□□□ 0.43
CAPN3P20807 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.74■□□□□ 0.43
CAPN3P20807 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN3P20807 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CAPN3P20807 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN3P20807 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN3P20807 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN3P20807 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN3P20807 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN3P20807 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CAPN3P20807 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CAPN3P20807 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
CAPN3P20807 AC004980.1-204ENST00000429707 299 ntBASIC17.74■□□□□ 0.43
CAPN3P20807 SLC25A6P5-201ENST00000435663 894 ntBASIC17.74■□□□□ 0.43
CAPN3P20807 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.74■□□□□ 0.43
CAPN3P20807 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.74■□□□□ 0.43
CAPN3P20807 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CAPN3P20807 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.74■□□□□ 0.43
CAPN3P20807 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.74■□□□□ 0.43
CAPN3P20807 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.74■□□□□ 0.43
CAPN3P20807 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CAPN3P20807 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CAPN3P20807 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN3P20807 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.73■□□□□ 0.43
CAPN3P20807 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN3P20807 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.73■□□□□ 0.43
CAPN3P20807 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN3P20807 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN3P20807 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN3P20807 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN3P20807 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN3P20807 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN3P20807 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CAPN3P20807 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.73■□□□□ 0.43
CAPN3P20807 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.73■□□□□ 0.43
CAPN3P20807 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.73■□□□□ 0.43
CAPN3P20807 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.73■□□□□ 0.43
CAPN3P20807 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.73■□□□□ 0.43
CAPN3P20807 AC113410.3-201ENST00000623366 203 ntBASIC17.73■□□□□ 0.43
CAPN3P20807 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.73■□□□□ 0.43
CAPN3P20807 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN3P20807 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN3P20807 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN3P20807 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
CAPN3P20807 MYLKP1-201ENST00000509077 1580 ntBASIC17.73■□□□□ 0.43
CAPN3P20807 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CAPN3P20807 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN3P20807 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CAPN3P20807 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CAPN3P20807 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN3P20807 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN3P20807 HTR7P1-201ENST00000538670 1336 ntBASIC17.72■□□□□ 0.43
CAPN3P20807 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.72■□□□□ 0.43
CAPN3P20807 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.72■□□□□ 0.43
CAPN3P20807 AC139713.2-201ENST00000641328 2723 ntBASIC17.72■□□□□ 0.43
CAPN3P20807 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CAPN3P20807 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CAPN3P20807 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
CAPN3P20807 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms