Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.21■□□□□ 0.67
TCF4P15884 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.21■□□□□ 0.67
TCF4P15884 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TCF4P15884 PHGDH-209ENST00000641074 1780 ntBASIC19.21■□□□□ 0.67
TCF4P15884 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TCF4P15884 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCF4P15884 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TCF4P15884 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TCF4P15884 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCF4P15884 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TCF4P15884 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TCF4P15884 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCF4P15884 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TCF4P15884 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCF4P15884 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.2■□□□□ 0.66
TCF4P15884 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TCF4P15884 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCF4P15884 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.2■□□□□ 0.66
TCF4P15884 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCF4P15884 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TCF4P15884 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.2■□□□□ 0.66
TCF4P15884 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TCF4P15884 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCF4P15884 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TCF4P15884 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TCF4P15884 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.2■□□□□ 0.66
TCF4P15884 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TCF4P15884 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.2■□□□□ 0.66
TCF4P15884 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.2■□□□□ 0.66
TCF4P15884 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TCF4P15884 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCF4P15884 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCF4P15884 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TCF4P15884 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCF4P15884 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCF4P15884 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TCF4P15884 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.2■□□□□ 0.66
TCF4P15884 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCF4P15884 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TCF4P15884 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCF4P15884 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TCF4P15884 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TCF4P15884 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCF4P15884 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TCF4P15884 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCF4P15884 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TCF4P15884 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TCF4P15884 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCF4P15884 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.19■□□□□ 0.66
TCF4P15884 AC087499.1-201ENST00000418141 1075 ntBASIC19.19■□□□□ 0.66
TCF4P15884 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.19■□□□□ 0.66
TCF4P15884 AC009947.2-201ENST00000444014 672 ntBASIC19.19■□□□□ 0.66
TCF4P15884 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TCF4P15884 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.19■□□□□ 0.66
TCF4P15884 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.19■□□□□ 0.66
TCF4P15884 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.19■□□□□ 0.66
TCF4P15884 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TCF4P15884 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TCF4P15884 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TCF4P15884 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCF4P15884 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCF4P15884 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.19■□□□□ 0.66
TCF4P15884 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCF4P15884 AL096828.2-201ENST00000567259 1965 ntBASIC19.19■□□□□ 0.66
TCF4P15884 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCF4P15884 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCF4P15884 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCF4P15884 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.18■□□□□ 0.66
TCF4P15884 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TCF4P15884 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCF4P15884 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
TCF4P15884 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCF4P15884 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TCF4P15884 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
TCF4P15884 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCF4P15884 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.18■□□□□ 0.66
TCF4P15884 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCF4P15884 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.18■□□□□ 0.66
TCF4P15884 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCF4P15884 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.18■□□□□ 0.66
TCF4P15884 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.18■□□□□ 0.66
TCF4P15884 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.18■□□□□ 0.66
TCF4P15884 AC112497.1-201ENST00000624824 639 ntBASIC19.18■□□□□ 0.66
TCF4P15884 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.18■□□□□ 0.66
TCF4P15884 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TCF4P15884 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TCF4P15884 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
TCF4P15884 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCF4P15884 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCF4P15884 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCF4P15884 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.18■□□□□ 0.66
TCF4P15884 LINC01568-207ENST00000641790 1380 ntBASIC19.18■□□□□ 0.66
TCF4P15884 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TCF4P15884 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.17■□□□□ 0.66
TCF4P15884 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCF4P15884 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.17■□□□□ 0.66
TCF4P15884 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.17■□□□□ 0.66
TCF4P15884 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.17■□□□□ 0.66
TCF4P15884 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TCF4P15884 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms