Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CDH1P12830 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CDH1P12830 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
CDH1P12830 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CDH1P12830 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.96■□□□□ 0.46
CDH1P12830 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CDH1P12830 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH1P12830 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH1P12830 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH1P12830 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH1P12830 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CDH1P12830 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
CDH1P12830 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CDH1P12830 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.95■□□□□ 0.46
CDH1P12830 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH1P12830 AC211429.1-201ENST00000415277 523 ntBASIC17.95■□□□□ 0.46
CDH1P12830 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH1P12830 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH1P12830 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH1P12830 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.95■□□□□ 0.46
CDH1P12830 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH1P12830 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH1P12830 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH1P12830 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH1P12830 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH1P12830 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH1P12830 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CDH1P12830 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH1P12830 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.95■□□□□ 0.46
CDH1P12830 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH1P12830 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CDH1P12830 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.95■□□□□ 0.46
CDH1P12830 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CDH1P12830 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH1P12830 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
CDH1P12830 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CDH1P12830 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CDH1P12830 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH1P12830 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.94■□□□□ 0.46
CDH1P12830 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH1P12830 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH1P12830 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH1P12830 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
CDH1P12830 ABALON-201ENST00000629058 1903 ntBASIC17.94■□□□□ 0.46
CDH1P12830 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH1P12830 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH1P12830 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH1P12830 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CDH1P12830 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH1P12830 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH1P12830 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.94■□□□□ 0.46
CDH1P12830 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.94■□□□□ 0.46
CDH1P12830 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.94■□□□□ 0.46
CDH1P12830 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.94■□□□□ 0.46
CDH1P12830 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH1P12830 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH1P12830 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.94■□□□□ 0.46
CDH1P12830 WWOX-216ENST00000569818 525 ntBASIC17.94■□□□□ 0.46
CDH1P12830 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH1P12830 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CDH1P12830 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CDH1P12830 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH1P12830 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH1P12830 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.94■□□□□ 0.46
CDH1P12830 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH1P12830 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.94■□□□□ 0.46
CDH1P12830 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH1P12830 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
CDH1P12830 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.94■□□□□ 0.46
CDH1P12830 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH1P12830 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
CDH1P12830 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH1P12830 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH1P12830 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH1P12830 AC126763.1-201ENST00000552015 2118 ntBASIC17.93■□□□□ 0.46
CDH1P12830 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH1P12830 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.93■□□□□ 0.46
CDH1P12830 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH1P12830 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH1P12830 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH1P12830 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH1P12830 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH1P12830 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH1P12830 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH1P12830 SLC25A3P1-201ENST00000443844 931 ntBASIC17.93■□□□□ 0.46
CDH1P12830 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH1P12830 AC012306.2-201ENST00000609350 630 ntBASIC17.93■□□□□ 0.46
CDH1P12830 AC097493.4-201ENST00000641197 219 ntBASIC17.93■□□□□ 0.46
CDH1P12830 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH1P12830 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH1P12830 AC034236.2-201ENST00000606662 1610 ntBASIC17.93■□□□□ 0.46
CDH1P12830 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH1P12830 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.93■□□□□ 0.46
CDH1P12830 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH1P12830 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH1P12830 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH1P12830 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CDH1P12830 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH1P12830 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH1P12830 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms