Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC172P0C7W6 AL355355.2-201ENST00000442321 338 ntBASIC19.93■□□□□ 0.78
CCDC172P0C7W6 GCSHP5-201ENST00000443090 522 ntBASIC19.93■□□□□ 0.78
CCDC172P0C7W6 AL158047.1-201ENST00000445918 881 ntBASIC19.93■□□□□ 0.78
CCDC172P0C7W6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC172P0C7W6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC172P0C7W6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC172P0C7W6 AC233702.5-201ENST00000584107 538 ntBASIC19.93■□□□□ 0.78
CCDC172P0C7W6 AC008622.2-201ENST00000617006 1229 ntBASIC19.93■□□□□ 0.78
CCDC172P0C7W6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC172P0C7W6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CCDC172P0C7W6 AC034236.2-201ENST00000606662 1610 ntBASIC19.93■□□□□ 0.78
CCDC172P0C7W6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC172P0C7W6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC172P0C7W6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC172P0C7W6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CCDC172P0C7W6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC172P0C7W6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC172P0C7W6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC172P0C7W6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC172P0C7W6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC172P0C7W6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CCDC172P0C7W6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC172P0C7W6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC172P0C7W6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC172P0C7W6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
CCDC172P0C7W6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC172P0C7W6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC172P0C7W6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CCDC172P0C7W6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC172P0C7W6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC172P0C7W6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC172P0C7W6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC172P0C7W6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC172P0C7W6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC172P0C7W6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.92■□□□□ 0.78
CCDC172P0C7W6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC172P0C7W6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.92■□□□□ 0.78
CCDC172P0C7W6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.92■□□□□ 0.78
CCDC172P0C7W6 AL049637.2-201ENST00000641778 930 ntBASIC19.92■□□□□ 0.78
CCDC172P0C7W6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC172P0C7W6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
CCDC172P0C7W6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CCDC172P0C7W6 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.91■□□□□ 0.78
CCDC172P0C7W6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC172P0C7W6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC172P0C7W6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC172P0C7W6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC172P0C7W6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC172P0C7W6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC172P0C7W6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC172P0C7W6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC172P0C7W6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCDC172P0C7W6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC172P0C7W6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
CCDC172P0C7W6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCDC172P0C7W6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC172P0C7W6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCDC172P0C7W6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CCDC172P0C7W6 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC172P0C7W6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC172P0C7W6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC172P0C7W6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCDC172P0C7W6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC172P0C7W6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CCDC172P0C7W6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC172P0C7W6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC172P0C7W6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC172P0C7W6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC172P0C7W6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CCDC172P0C7W6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CCDC172P0C7W6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC172P0C7W6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC172P0C7W6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC172P0C7W6 AC113410.3-201ENST00000623366 203 ntBASIC19.9■□□□□ 0.78
CCDC172P0C7W6 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.9■□□□□ 0.78
CCDC172P0C7W6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CCDC172P0C7W6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CCDC172P0C7W6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC172P0C7W6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC172P0C7W6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC172P0C7W6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC172P0C7W6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC172P0C7W6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC172P0C7W6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC172P0C7W6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.9■□□□□ 0.78
CCDC172P0C7W6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC172P0C7W6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC172P0C7W6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
CCDC172P0C7W6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC172P0C7W6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CCDC172P0C7W6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC172P0C7W6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC172P0C7W6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC172P0C7W6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC172P0C7W6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC172P0C7W6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC172P0C7W6 GPAT2P1-201ENST00000444924 1672 ntBASIC19.89■□□□□ 0.77
CCDC172P0C7W6 AC098590.1-201ENST00000468126 897 ntBASIC19.89■□□□□ 0.77
CCDC172P0C7W6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms