Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFAP04085 DRAXINP1-201ENST00000437611 948 ntBASIC17.21■□□□□ 0.35
PDGFAP04085 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFAP04085 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFAP04085 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.21■□□□□ 0.35
PDGFAP04085 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFAP04085 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFAP04085 FOSL1P1-201ENST00000511041 816 ntBASIC17.21■□□□□ 0.35
PDGFAP04085 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFAP04085 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.21■□□□□ 0.35
PDGFAP04085 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.21■□□□□ 0.35
PDGFAP04085 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.21■□□□□ 0.35
PDGFAP04085 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.21■□□□□ 0.35
PDGFAP04085 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.21■□□□□ 0.35
PDGFAP04085 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFAP04085 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.21■□□□□ 0.35
PDGFAP04085 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.21■□□□□ 0.35
PDGFAP04085 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFAP04085 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PDGFAP04085 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PDGFAP04085 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFAP04085 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFAP04085 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFAP04085 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
PDGFAP04085 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
PDGFAP04085 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFAP04085 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.2■□□□□ 0.34
PDGFAP04085 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFAP04085 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.2■□□□□ 0.34
PDGFAP04085 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.2■□□□□ 0.34
PDGFAP04085 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.2■□□□□ 0.34
PDGFAP04085 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.2■□□□□ 0.34
PDGFAP04085 TOB2P1-201ENST00000469761 992 ntBASIC17.2■□□□□ 0.34
PDGFAP04085 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.2■□□□□ 0.34
PDGFAP04085 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFAP04085 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFAP04085 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.2■□□□□ 0.34
PDGFAP04085 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.2■□□□□ 0.34
PDGFAP04085 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.2■□□□□ 0.34
PDGFAP04085 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PDGFAP04085 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.2■□□□□ 0.34
PDGFAP04085 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFAP04085 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFAP04085 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFAP04085 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PDGFAP04085 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PDGFAP04085 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PDGFAP04085 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFAP04085 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.19■□□□□ 0.34
PDGFAP04085 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFAP04085 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
PDGFAP04085 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFAP04085 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFAP04085 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PDGFAP04085 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PDGFAP04085 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFAP04085 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.19■□□□□ 0.34
PDGFAP04085 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFAP04085 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFAP04085 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFAP04085 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.19■□□□□ 0.34
PDGFAP04085 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.19■□□□□ 0.34
PDGFAP04085 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFAP04085 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFAP04085 AL160237.2-201ENST00000556165 472 ntBASIC17.19■□□□□ 0.34
PDGFAP04085 AC091304.2-201ENST00000564639 760 ntBASIC17.19■□□□□ 0.34
PDGFAP04085 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFAP04085 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFAP04085 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PDGFAP04085 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFAP04085 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFAP04085 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFAP04085 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFAP04085 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PDGFAP04085 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.19■□□□□ 0.34
PDGFAP04085 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFAP04085 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFAP04085 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFAP04085 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFAP04085 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PDGFAP04085 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PDGFAP04085 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PDGFAP04085 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.18■□□□□ 0.34
PDGFAP04085 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDGFAP04085 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDGFAP04085 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDGFAP04085 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDGFAP04085 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDGFAP04085 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PDGFAP04085 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.18■□□□□ 0.34
PDGFAP04085 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PDGFAP04085 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.18■□□□□ 0.34
PDGFAP04085 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
PDGFAP04085 AL022342.1-201ENST00000400363 863 ntBASIC17.18■□□□□ 0.34
PDGFAP04085 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDGFAP04085 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDGFAP04085 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.18■□□□□ 0.34
PDGFAP04085 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDGFAP04085 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PDGFAP04085 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms