Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DRAP01903 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.8■□□□□ 0.76
HLA-DRAP01903 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DRAP01903 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DRAP01903 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HLA-DRAP01903 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
HLA-DRAP01903 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.8■□□□□ 0.76
HLA-DRAP01903 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DRAP01903 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DRAP01903 SPDYE15P-201ENST00000424157 909 ntBASIC19.8■□□□□ 0.76
HLA-DRAP01903 RASA4DP-201ENST00000460726 1199 ntBASIC19.8■□□□□ 0.76
HLA-DRAP01903 AC034232.1-201ENST00000506026 1064 ntBASIC19.8■□□□□ 0.76
HLA-DRAP01903 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DRAP01903 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
HLA-DRAP01903 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DRAP01903 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.8■□□□□ 0.76
HLA-DRAP01903 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.8■□□□□ 0.76
HLA-DRAP01903 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DRAP01903 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DRAP01903 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HLA-DRAP01903 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HLA-DRAP01903 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.79■□□□□ 0.76
HLA-DRAP01903 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DRAP01903 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DRAP01903 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DRAP01903 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.79■□□□□ 0.76
HLA-DRAP01903 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.79■□□□□ 0.76
HLA-DRAP01903 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DRAP01903 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.79■□□□□ 0.76
HLA-DRAP01903 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DRAP01903 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DRAP01903 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DRAP01903 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DRAP01903 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DRAP01903 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DRAP01903 KRT18P38-201ENST00000449496 1282 ntBASIC19.79■□□□□ 0.76
HLA-DRAP01903 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.79■□□□□ 0.76
HLA-DRAP01903 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.79■□□□□ 0.76
HLA-DRAP01903 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.79■□□□□ 0.76
HLA-DRAP01903 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.79■□□□□ 0.76
HLA-DRAP01903 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DRAP01903 ESPNP-201ENST00000270691 2015 ntBASIC19.79■□□□□ 0.76
HLA-DRAP01903 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DRAP01903 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DRAP01903 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DRAP01903 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DRAP01903 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DRAP01903 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HLA-DRAP01903 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.78■□□□□ 0.76
HLA-DRAP01903 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DRAP01903 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
HLA-DRAP01903 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DRAP01903 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DRAP01903 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.78■□□□□ 0.76
HLA-DRAP01903 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DRAP01903 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DRAP01903 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DRAP01903 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DRAP01903 STARP1-201ENST00000397973 869 ntBASIC19.78■□□□□ 0.76
HLA-DRAP01903 FAM210CP-201ENST00000445714 574 ntBASIC19.78■□□□□ 0.76
HLA-DRAP01903 DUX4L26-201ENST00000489078 1255 ntBASIC19.78■□□□□ 0.76
HLA-DRAP01903 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.78■□□□□ 0.76
HLA-DRAP01903 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.78■□□□□ 0.76
HLA-DRAP01903 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DRAP01903 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.78■□□□□ 0.76
HLA-DRAP01903 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HLA-DRAP01903 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
HLA-DRAP01903 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
HLA-DRAP01903 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HLA-DRAP01903 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DRAP01903 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DRAP01903 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DRAP01903 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DRAP01903 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DRAP01903 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DRAP01903 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DRAP01903 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DRAP01903 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DRAP01903 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DRAP01903 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DRAP01903 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HLA-DRAP01903 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.77■□□□□ 0.76
HLA-DRAP01903 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DRAP01903 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.77■□□□□ 0.76
HLA-DRAP01903 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DRAP01903 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.77■□□□□ 0.76
HLA-DRAP01903 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DRAP01903 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
HLA-DRAP01903 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DRAP01903 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
HLA-DRAP01903 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.77■□□□□ 0.76
HLA-DRAP01903 AL359075.1-203ENST00000462729 1002 ntBASIC19.77■□□□□ 0.76
HLA-DRAP01903 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DRAP01903 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.77■□□□□ 0.76
HLA-DRAP01903 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.77■□□□□ 0.76
HLA-DRAP01903 AC079602.3-201ENST00000623931 403 ntBASIC19.77■□□□□ 0.76
HLA-DRAP01903 GMCL1P1-201ENST00000463439 1581 ntBASIC19.77■□□□□ 0.76
HLA-DRAP01903 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
HLA-DRAP01903 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HLA-DRAP01903 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms