Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IFNA1P01562 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
IFNA1P01562 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
IFNA1P01562 AC112777.1-201ENST00000540175 1423 ntBASIC14.59□□□□□ -0.07
IFNA1P01562 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
IFNA1P01562 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.59□□□□□ -0.07
IFNA1P01562 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
IFNA1P01562 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
IFNA1P01562 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
IFNA1P01562 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
IFNA1P01562 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.59□□□□□ -0.07
IFNA1P01562 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
IFNA1P01562 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
IFNA1P01562 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
IFNA1P01562 TSPY21P-201ENST00000433481 731 ntBASIC14.59□□□□□ -0.07
IFNA1P01562 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.59□□□□□ -0.07
IFNA1P01562 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC14.59□□□□□ -0.07
IFNA1P01562 AC016405.3-201ENST00000607710 860 ntBASIC14.59□□□□□ -0.07
IFNA1P01562 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
IFNA1P01562 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
IFNA1P01562 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
IFNA1P01562 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IFNA1P01562 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
IFNA1P01562 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
IFNA1P01562 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
IFNA1P01562 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IFNA1P01562 AL118508.1-201ENST00000613502 2345 ntBASIC14.59□□□□□ -0.07
IFNA1P01562 NKILA-202ENST00000614771 2598 ntBASIC14.59□□□□□ -0.07
IFNA1P01562 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.59□□□□□ -0.07
IFNA1P01562 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IFNA1P01562 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
IFNA1P01562 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IFNA1P01562 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
IFNA1P01562 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
IFNA1P01562 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IFNA1P01562 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IFNA1P01562 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
IFNA1P01562 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
IFNA1P01562 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.58□□□□□ -0.07
IFNA1P01562 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
IFNA1P01562 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
IFNA1P01562 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.58□□□□□ -0.07
IFNA1P01562 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
IFNA1P01562 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
IFNA1P01562 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
IFNA1P01562 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
IFNA1P01562 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.58□□□□□ -0.08
IFNA1P01562 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
IFNA1P01562 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFNA1P01562 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
IFNA1P01562 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFNA1P01562 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.58□□□□□ -0.08
IFNA1P01562 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
IFNA1P01562 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFNA1P01562 COX20-201ENST00000366528 568 ntTSL 2 BASIC14.58□□□□□ -0.08
IFNA1P01562 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFNA1P01562 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC14.58□□□□□ -0.08
IFNA1P01562 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
IFNA1P01562 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
IFNA1P01562 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFNA1P01562 C2orf69P4-201ENST00000565394 541 ntBASIC14.58□□□□□ -0.08
IFNA1P01562 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.58□□□□□ -0.08
IFNA1P01562 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFNA1P01562 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFNA1P01562 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.58□□□□□ -0.08
IFNA1P01562 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFNA1P01562 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFNA1P01562 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.58□□□□□ -0.08
IFNA1P01562 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFNA1P01562 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
IFNA1P01562 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFNA1P01562 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
IFNA1P01562 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.58□□□□□ -0.08
IFNA1P01562 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFNA1P01562 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFNA1P01562 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFNA1P01562 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFNA1P01562 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
IFNA1P01562 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFNA1P01562 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFNA1P01562 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFNA1P01562 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IFNA1P01562 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
IFNA1P01562 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IFNA1P01562 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IFNA1P01562 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
IFNA1P01562 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
IFNA1P01562 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.57□□□□□ -0.08
IFNA1P01562 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IFNA1P01562 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IFNA1P01562 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
IFNA1P01562 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.57□□□□□ -0.08
IFNA1P01562 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IFNA1P01562 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
IFNA1P01562 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IFNA1P01562 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.57□□□□□ -0.08
IFNA1P01562 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
IFNA1P01562 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IFNA1P01562 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IFNA1P01562 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms