Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NKX2-2O95096 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17■□□□□ 0.31
NKX2-2O95096 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NKX2-2O95096 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NKX2-2O95096 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NKX2-2O95096 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.99■□□□□ 0.31
NKX2-2O95096 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NKX2-2O95096 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NKX2-2O95096 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NKX2-2O95096 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.99■□□□□ 0.31
NKX2-2O95096 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.99■□□□□ 0.31
NKX2-2O95096 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NKX2-2O95096 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
NKX2-2O95096 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NKX2-2O95096 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
NKX2-2O95096 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.99■□□□□ 0.31
NKX2-2O95096 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NKX2-2O95096 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NKX2-2O95096 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
NKX2-2O95096 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NKX2-2O95096 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
NKX2-2O95096 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NKX2-2O95096 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
NKX2-2O95096 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NKX2-2O95096 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
NKX2-2O95096 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
NKX2-2O95096 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
NKX2-2O95096 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NKX2-2O95096 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.99■□□□□ 0.31
NKX2-2O95096 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.99■□□□□ 0.31
NKX2-2O95096 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
NKX2-2O95096 GCSHP2-201ENST00000560971 527 ntBASIC16.99■□□□□ 0.31
NKX2-2O95096 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
NKX2-2O95096 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.99■□□□□ 0.31
NKX2-2O95096 AL031432.5-201ENST00000641059 760 ntBASIC16.99■□□□□ 0.31
NKX2-2O95096 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NKX2-2O95096 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NKX2-2O95096 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NKX2-2O95096 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.99■□□□□ 0.31
NKX2-2O95096 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
NKX2-2O95096 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.99■□□□□ 0.31
NKX2-2O95096 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
NKX2-2O95096 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
NKX2-2O95096 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.98■□□□□ 0.31
NKX2-2O95096 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NKX2-2O95096 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.98■□□□□ 0.31
NKX2-2O95096 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NKX2-2O95096 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.98■□□□□ 0.31
NKX2-2O95096 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NKX2-2O95096 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NKX2-2O95096 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
NKX2-2O95096 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NKX2-2O95096 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.98■□□□□ 0.31
NKX2-2O95096 BX664615.1-201ENST00000443558 458 ntBASIC16.98■□□□□ 0.31
NKX2-2O95096 COX11P1-201ENST00000489116 835 ntBASIC16.98■□□□□ 0.31
NKX2-2O95096 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NKX2-2O95096 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.98■□□□□ 0.31
NKX2-2O95096 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.98■□□□□ 0.31
NKX2-2O95096 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.98■□□□□ 0.31
NKX2-2O95096 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.98■□□□□ 0.31
NKX2-2O95096 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.98■□□□□ 0.31
NKX2-2O95096 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NKX2-2O95096 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
NKX2-2O95096 AL023973.1-201ENST00000624619 620 ntBASIC16.98■□□□□ 0.31
NKX2-2O95096 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.98■□□□□ 0.31
NKX2-2O95096 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NKX2-2O95096 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
NKX2-2O95096 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NKX2-2O95096 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NKX2-2O95096 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NKX2-2O95096 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NKX2-2O95096 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.98■□□□□ 0.31
NKX2-2O95096 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NKX2-2O95096 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
NKX2-2O95096 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NKX2-2O95096 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NKX2-2O95096 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NKX2-2O95096 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NKX2-2O95096 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NKX2-2O95096 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.97■□□□□ 0.31
NKX2-2O95096 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.97■□□□□ 0.31
NKX2-2O95096 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NKX2-2O95096 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NKX2-2O95096 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.97■□□□□ 0.31
NKX2-2O95096 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NKX2-2O95096 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.97■□□□□ 0.31
NKX2-2O95096 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NKX2-2O95096 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.97■□□□□ 0.31
NKX2-2O95096 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NKX2-2O95096 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
NKX2-2O95096 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
NKX2-2O95096 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NKX2-2O95096 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NKX2-2O95096 AC005521.1-201ENST00000393351 872 ntBASIC16.97■□□□□ 0.31
NKX2-2O95096 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.97■□□□□ 0.31
NKX2-2O95096 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NKX2-2O95096 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.97■□□□□ 0.31
NKX2-2O95096 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.97■□□□□ 0.31
NKX2-2O95096 AC140113.3-201ENST00000605663 199 ntBASIC16.97■□□□□ 0.31
NKX2-2O95096 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms