Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
KDM4BO94953 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDM4BO94953 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDM4BO94953 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
KDM4BO94953 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
KDM4BO94953 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDM4BO94953 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.19■□□□□ 0.18
KDM4BO94953 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
KDM4BO94953 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDM4BO94953 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDM4BO94953 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDM4BO94953 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDM4BO94953 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDM4BO94953 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDM4BO94953 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KDM4BO94953 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
KDM4BO94953 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.19■□□□□ 0.18
KDM4BO94953 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.19■□□□□ 0.18
KDM4BO94953 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDM4BO94953 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
KDM4BO94953 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
KDM4BO94953 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.19■□□□□ 0.18
KDM4BO94953 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.19■□□□□ 0.18
KDM4BO94953 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
KDM4BO94953 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.19■□□□□ 0.18
KDM4BO94953 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.19■□□□□ 0.18
KDM4BO94953 KRT18P6-201ENST00000555540 1265 ntBASIC16.19■□□□□ 0.18
KDM4BO94953 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.19■□□□□ 0.18
KDM4BO94953 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KDM4BO94953 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.19■□□□□ 0.18
KDM4BO94953 AC008894.3-201ENST00000624324 3103 ntBASIC16.19■□□□□ 0.18
KDM4BO94953 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDM4BO94953 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KDM4BO94953 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDM4BO94953 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
KDM4BO94953 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KDM4BO94953 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
KDM4BO94953 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.19■□□□□ 0.18
KDM4BO94953 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDM4BO94953 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDM4BO94953 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
KDM4BO94953 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.18■□□□□ 0.18
KDM4BO94953 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KDM4BO94953 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.18■□□□□ 0.18
KDM4BO94953 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDM4BO94953 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDM4BO94953 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDM4BO94953 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.18■□□□□ 0.18
KDM4BO94953 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDM4BO94953 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
KDM4BO94953 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.18■□□□□ 0.18
KDM4BO94953 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDM4BO94953 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDM4BO94953 AC239809.2-201ENST00000415381 517 ntBASIC16.18■□□□□ 0.18
KDM4BO94953 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDM4BO94953 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDM4BO94953 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.18■□□□□ 0.18
KDM4BO94953 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
KDM4BO94953 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.18■□□□□ 0.18
KDM4BO94953 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.18■□□□□ 0.18
KDM4BO94953 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDM4BO94953 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDM4BO94953 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KDM4BO94953 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KDM4BO94953 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDM4BO94953 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
KDM4BO94953 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KDM4BO94953 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KDM4BO94953 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.18■□□□□ 0.18
KDM4BO94953 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.18■□□□□ 0.18
KDM4BO94953 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
KDM4BO94953 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KDM4BO94953 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.18■□□□□ 0.18
KDM4BO94953 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDM4BO94953 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KDM4BO94953 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KDM4BO94953 AL162741.1-201ENST00000565563 1558 ntBASIC16.17■□□□□ 0.18
KDM4BO94953 NFIC-211ENST00000641145 8399 ntBASIC16.17■□□□□ 0.18
KDM4BO94953 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
KDM4BO94953 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KDM4BO94953 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
KDM4BO94953 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
KDM4BO94953 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.17■□□□□ 0.18
KDM4BO94953 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KDM4BO94953 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.17■□□□□ 0.18
KDM4BO94953 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
KDM4BO94953 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KDM4BO94953 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.17■□□□□ 0.18
KDM4BO94953 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
KDM4BO94953 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
KDM4BO94953 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KDM4BO94953 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.17■□□□□ 0.18
KDM4BO94953 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KDM4BO94953 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.17■□□□□ 0.18
KDM4BO94953 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KDM4BO94953 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.17■□□□□ 0.18
KDM4BO94953 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KDM4BO94953 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KDM4BO94953 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.17■□□□□ 0.18
KDM4BO94953 TSPY23P-201ENST00000440136 739 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms