Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.3■□□□□ 0.68
BEST1O76090 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BEST1O76090 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.3■□□□□ 0.68
BEST1O76090 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
BEST1O76090 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BEST1O76090 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.3■□□□□ 0.68
BEST1O76090 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST1O76090 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST1O76090 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST1O76090 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST1O76090 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.29■□□□□ 0.68
BEST1O76090 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BEST1O76090 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST1O76090 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST1O76090 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST1O76090 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.29■□□□□ 0.68
BEST1O76090 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BEST1O76090 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
BEST1O76090 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST1O76090 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST1O76090 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST1O76090 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST1O76090 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST1O76090 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.29■□□□□ 0.68
BEST1O76090 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.29■□□□□ 0.68
BEST1O76090 KRT18P48-201ENST00000434763 852 ntBASIC19.29■□□□□ 0.68
BEST1O76090 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BEST1O76090 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.29■□□□□ 0.68
BEST1O76090 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BEST1O76090 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST1O76090 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.29■□□□□ 0.68
BEST1O76090 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST1O76090 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BEST1O76090 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.29■□□□□ 0.68
BEST1O76090 Z83836.1-201ENST00000624605 1642 ntBASIC19.29■□□□□ 0.68
BEST1O76090 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BEST1O76090 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.28■□□□□ 0.68
BEST1O76090 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BEST1O76090 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
BEST1O76090 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BEST1O76090 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
BEST1O76090 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BEST1O76090 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.28■□□□□ 0.68
BEST1O76090 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BEST1O76090 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BEST1O76090 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.28■□□□□ 0.68
BEST1O76090 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.28■□□□□ 0.68
BEST1O76090 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BEST1O76090 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BEST1O76090 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.28■□□□□ 0.68
BEST1O76090 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BEST1O76090 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BEST1O76090 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.28■□□□□ 0.68
BEST1O76090 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.28■□□□□ 0.68
BEST1O76090 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.28■□□□□ 0.68
BEST1O76090 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BEST1O76090 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.28■□□□□ 0.68
BEST1O76090 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BEST1O76090 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BEST1O76090 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.28■□□□□ 0.68
BEST1O76090 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
BEST1O76090 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BEST1O76090 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.28■□□□□ 0.68
BEST1O76090 AC016734.2-201ENST00000624325 1377 ntBASIC19.28■□□□□ 0.68
BEST1O76090 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.28■□□□□ 0.68
BEST1O76090 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BEST1O76090 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.28■□□□□ 0.68
BEST1O76090 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
BEST1O76090 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.27■□□□□ 0.68
BEST1O76090 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
BEST1O76090 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.27■□□□□ 0.68
BEST1O76090 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
BEST1O76090 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.27■□□□□ 0.68
BEST1O76090 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BEST1O76090 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BEST1O76090 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BEST1O76090 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
BEST1O76090 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.27■□□□□ 0.68
BEST1O76090 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BEST1O76090 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BEST1O76090 IGHGP-201ENST00000390555 1178 ntBASIC19.27■□□□□ 0.68
BEST1O76090 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BEST1O76090 TSPY22P-201ENST00000427496 604 ntBASIC19.27■□□□□ 0.68
BEST1O76090 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
BEST1O76090 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.27■□□□□ 0.68
BEST1O76090 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.27■□□□□ 0.68
BEST1O76090 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.27■□□□□ 0.68
BEST1O76090 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.27■□□□□ 0.68
BEST1O76090 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.27■□□□□ 0.68
BEST1O76090 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.27■□□□□ 0.68
BEST1O76090 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.27■□□□□ 0.68
BEST1O76090 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
BEST1O76090 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
BEST1O76090 AC093458.2-201ENST00000623150 629 ntBASIC19.27■□□□□ 0.68
BEST1O76090 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
BEST1O76090 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
BEST1O76090 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BEST1O76090 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
BEST1O76090 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
BEST1O76090 ESPNP-201ENST00000270691 2015 ntBASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms