Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 Z98044.1-201ENST00000632503 1764 ntBASIC17.76■□□□□ 0.43
SLC28A2O43868 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC28A2O43868 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SLC28A2O43868 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC28A2O43868 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.75■□□□□ 0.43
SLC28A2O43868 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A2O43868 RCC2P6-201ENST00000526625 1557 ntBASIC17.75■□□□□ 0.43
SLC28A2O43868 AC093525.10-201ENST00000625130 1569 ntBASIC17.75■□□□□ 0.43
SLC28A2O43868 AC092338.2-201ENST00000568827 1415 ntBASIC17.75■□□□□ 0.43
SLC28A2O43868 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.75■□□□□ 0.43
SLC28A2O43868 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SLC28A2O43868 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A2O43868 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A2O43868 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A2O43868 TSPY17P-201ENST00000450329 467 ntBASIC17.75■□□□□ 0.43
SLC28A2O43868 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A2O43868 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.75■□□□□ 0.43
SLC28A2O43868 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
SLC28A2O43868 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.75■□□□□ 0.43
SLC28A2O43868 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.75■□□□□ 0.43
SLC28A2O43868 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A2O43868 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SLC28A2O43868 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
SLC28A2O43868 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A2O43868 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A2O43868 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
SLC28A2O43868 AL512353.2-201ENST00000448759 1962 ntBASIC17.75■□□□□ 0.43
SLC28A2O43868 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
SLC28A2O43868 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A2O43868 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A2O43868 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SLC28A2O43868 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SLC28A2O43868 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLC28A2O43868 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC28A2O43868 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
SLC28A2O43868 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A2O43868 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
SLC28A2O43868 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.74■□□□□ 0.43
SLC28A2O43868 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A2O43868 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A2O43868 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A2O43868 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.74■□□□□ 0.43
SLC28A2O43868 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A2O43868 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A2O43868 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A2O43868 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A2O43868 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC28A2O43868 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC28A2O43868 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC28A2O43868 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.74■□□□□ 0.43
SLC28A2O43868 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A2O43868 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.74■□□□□ 0.43
SLC28A2O43868 AC092329.2-201ENST00000598402 547 ntBASIC17.74■□□□□ 0.43
SLC28A2O43868 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.74■□□□□ 0.43
SLC28A2O43868 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC28A2O43868 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A2O43868 AC096733.2-201ENST00000609937 1394 ntBASIC17.74■□□□□ 0.43
SLC28A2O43868 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A2O43868 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A2O43868 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A2O43868 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A2O43868 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SLC28A2O43868 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC28A2O43868 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.74■□□□□ 0.43
SLC28A2O43868 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A2O43868 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A2O43868 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A2O43868 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A2O43868 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A2O43868 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A2O43868 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A2O43868 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A2O43868 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A2O43868 AC004951.3-201ENST00000418645 1148 ntBASIC17.73■□□□□ 0.43
SLC28A2O43868 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SLC28A2O43868 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SLC28A2O43868 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.73■□□□□ 0.43
SLC28A2O43868 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A2O43868 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.73■□□□□ 0.43
SLC28A2O43868 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.73■□□□□ 0.43
SLC28A2O43868 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SLC28A2O43868 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SLC28A2O43868 AC083849.1-201ENST00000615227 514 ntBASIC17.73■□□□□ 0.43
SLC28A2O43868 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
SLC28A2O43868 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
SLC28A2O43868 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.73■□□□□ 0.43
SLC28A2O43868 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A2O43868 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC28A2O43868 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SLC28A2O43868 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.73■□□□□ 0.43
SLC28A2O43868 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A2O43868 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A2O43868 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC28A2O43868 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC28A2O43868 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SLC28A2O43868 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.72■□□□□ 0.43
SLC28A2O43868 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC28A2O43868 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC28A2O43868 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
SLC28A2O43868 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms