Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.77■□□□□ 0.92
SPDYE4A6NLX3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SPDYE4A6NLX3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPDYE4A6NLX3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SPDYE4A6NLX3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPDYE4A6NLX3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPDYE4A6NLX3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.91
SPDYE4A6NLX3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SPDYE4A6NLX3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.77■□□□□ 0.91
SPDYE4A6NLX3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SPDYE4A6NLX3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
SPDYE4A6NLX3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 AC084018.2-201ENST00000613093 2607 ntBASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 B3GAT3P1-201ENST00000471720 806 ntBASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 AC108673.2-201ENST00000608909 565 ntBASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SPDYE4A6NLX3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 AC104076.2-201ENST00000448912 469 ntBASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 EGLN1P1-201ENST00000531623 762 ntBASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPDYE4A6NLX3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.74■□□□□ 0.91
SPDYE4A6NLX3 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms