Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.48■□□□□ 0.23
TVP23AA6NH52 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.48■□□□□ 0.23
TVP23AA6NH52 AC142381.4-202ENST00000563973 229 ntBASIC16.48■□□□□ 0.23
TVP23AA6NH52 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.48■□□□□ 0.23
TVP23AA6NH52 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TVP23AA6NH52 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
TVP23AA6NH52 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TVP23AA6NH52 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TVP23AA6NH52 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.48■□□□□ 0.23
TVP23AA6NH52 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TVP23AA6NH52 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TVP23AA6NH52 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TVP23AA6NH52 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TVP23AA6NH52 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TVP23AA6NH52 AC099343.3-201ENST00000605834 2503 ntBASIC16.48■□□□□ 0.23
TVP23AA6NH52 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TVP23AA6NH52 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TVP23AA6NH52 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TVP23AA6NH52 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TVP23AA6NH52 MYLKP1-201ENST00000509077 1580 ntBASIC16.47■□□□□ 0.23
TVP23AA6NH52 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TVP23AA6NH52 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.47■□□□□ 0.23
TVP23AA6NH52 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
TVP23AA6NH52 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TVP23AA6NH52 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.47■□□□□ 0.23
TVP23AA6NH52 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TVP23AA6NH52 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.47■□□□□ 0.23
TVP23AA6NH52 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
TVP23AA6NH52 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TVP23AA6NH52 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.47■□□□□ 0.23
TVP23AA6NH52 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TVP23AA6NH52 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.47■□□□□ 0.23
TVP23AA6NH52 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.47■□□□□ 0.23
TVP23AA6NH52 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
TVP23AA6NH52 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.47■□□□□ 0.23
TVP23AA6NH52 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TVP23AA6NH52 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TVP23AA6NH52 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TVP23AA6NH52 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.47■□□□□ 0.23
TVP23AA6NH52 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TVP23AA6NH52 ESPNP-201ENST00000270691 2015 ntBASIC16.46■□□□□ 0.23
TVP23AA6NH52 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TVP23AA6NH52 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.46■□□□□ 0.23
TVP23AA6NH52 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TVP23AA6NH52 AL109659.2-201ENST00000606809 1674 ntBASIC16.46■□□□□ 0.23
TVP23AA6NH52 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.46■□□□□ 0.23
TVP23AA6NH52 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TVP23AA6NH52 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TVP23AA6NH52 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TVP23AA6NH52 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.46■□□□□ 0.23
TVP23AA6NH52 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TVP23AA6NH52 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TVP23AA6NH52 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.46■□□□□ 0.23
TVP23AA6NH52 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.46■□□□□ 0.23
TVP23AA6NH52 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TVP23AA6NH52 AL023284.2-201ENST00000405850 579 ntBASIC16.46■□□□□ 0.23
TVP23AA6NH52 AL158047.1-201ENST00000445918 881 ntBASIC16.46■□□□□ 0.23
TVP23AA6NH52 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.46■□□□□ 0.23
TVP23AA6NH52 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.46■□□□□ 0.23
TVP23AA6NH52 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.46■□□□□ 0.23
TVP23AA6NH52 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.46■□□□□ 0.23
TVP23AA6NH52 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TVP23AA6NH52 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TVP23AA6NH52 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TVP23AA6NH52 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.46■□□□□ 0.23
TVP23AA6NH52 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TVP23AA6NH52 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.46■□□□□ 0.23
TVP23AA6NH52 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TVP23AA6NH52 GPAT2P1-201ENST00000444924 1672 ntBASIC16.46■□□□□ 0.23
TVP23AA6NH52 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
TVP23AA6NH52 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TVP23AA6NH52 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.45■□□□□ 0.22
TVP23AA6NH52 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TVP23AA6NH52 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TVP23AA6NH52 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TVP23AA6NH52 AL135905.2-201ENST00000584934 1404 ntBASIC16.45■□□□□ 0.22
TVP23AA6NH52 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.45■□□□□ 0.22
TVP23AA6NH52 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TVP23AA6NH52 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TVP23AA6NH52 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.45■□□□□ 0.22
TVP23AA6NH52 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TVP23AA6NH52 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.45■□□□□ 0.22
TVP23AA6NH52 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TVP23AA6NH52 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TVP23AA6NH52 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TVP23AA6NH52 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.45■□□□□ 0.22
TVP23AA6NH52 MFAP1P1-201ENST00000442257 1255 ntBASIC16.45■□□□□ 0.22
TVP23AA6NH52 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.45■□□□□ 0.22
TVP23AA6NH52 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.45■□□□□ 0.22
TVP23AA6NH52 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.45■□□□□ 0.22
TVP23AA6NH52 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TVP23AA6NH52 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TVP23AA6NH52 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TVP23AA6NH52 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TVP23AA6NH52 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TVP23AA6NH52 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TVP23AA6NH52 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TVP23AA6NH52 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TVP23AA6NH52 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TVP23AA6NH52 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms