Protein–RNA interactions for Protein: A6NCI4

VWA3A, von Willebrand factor A domain-containing protein 3A, humanhuman

Predictions only

Length 1,184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3AA6NCI4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.92■□□□□ 0.94
VWA3AA6NCI4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
VWA3AA6NCI4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.92■□□□□ 0.94
VWA3AA6NCI4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.92■□□□□ 0.94
VWA3AA6NCI4 NOC2LP1-202ENST00000452600 2235 ntBASIC20.92■□□□□ 0.94
VWA3AA6NCI4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.92■□□□□ 0.94
VWA3AA6NCI4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.91■□□□□ 0.94
VWA3AA6NCI4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VWA3AA6NCI4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VWA3AA6NCI4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
VWA3AA6NCI4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VWA3AA6NCI4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VWA3AA6NCI4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
VWA3AA6NCI4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.91■□□□□ 0.94
VWA3AA6NCI4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.91■□□□□ 0.94
VWA3AA6NCI4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VWA3AA6NCI4 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.91■□□□□ 0.94
VWA3AA6NCI4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.91■□□□□ 0.94
VWA3AA6NCI4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VWA3AA6NCI4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.91■□□□□ 0.94
VWA3AA6NCI4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.91■□□□□ 0.94
VWA3AA6NCI4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.91■□□□□ 0.94
VWA3AA6NCI4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VWA3AA6NCI4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VWA3AA6NCI4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.91■□□□□ 0.94
VWA3AA6NCI4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 ESPNP-201ENST00000270691 2015 ntBASIC20.9■□□□□ 0.94
VWA3AA6NCI4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VWA3AA6NCI4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
VWA3AA6NCI4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.89■□□□□ 0.94
VWA3AA6NCI4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
VWA3AA6NCI4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VWA3AA6NCI4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VWA3AA6NCI4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
VWA3AA6NCI4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VWA3AA6NCI4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VWA3AA6NCI4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
VWA3AA6NCI4 NOC2LP2-201ENST00000407594 1944 ntBASIC20.89■□□□□ 0.93
VWA3AA6NCI4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VWA3AA6NCI4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VWA3AA6NCI4 HMGA1P5-201ENST00000412453 271 ntBASIC20.89■□□□□ 0.93
VWA3AA6NCI4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VWA3AA6NCI4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.89■□□□□ 0.93
VWA3AA6NCI4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VWA3AA6NCI4 AC112497.1-201ENST00000624824 639 ntBASIC20.89■□□□□ 0.93
VWA3AA6NCI4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
VWA3AA6NCI4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VWA3AA6NCI4 LTB4R2-202ENST00000528054 3092 ntBASIC20.89■□□□□ 0.93
VWA3AA6NCI4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VWA3AA6NCI4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
VWA3AA6NCI4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
VWA3AA6NCI4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VWA3AA6NCI4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.88■□□□□ 0.93
VWA3AA6NCI4 AL163051.1-201ENST00000569214 1512 ntBASIC20.88■□□□□ 0.93
VWA3AA6NCI4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VWA3AA6NCI4 ABALON-201ENST00000629058 1903 ntBASIC20.88■□□□□ 0.93
VWA3AA6NCI4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VWA3AA6NCI4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
VWA3AA6NCI4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VWA3AA6NCI4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VWA3AA6NCI4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VWA3AA6NCI4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VWA3AA6NCI4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
VWA3AA6NCI4 KRT18P22-201ENST00000402024 1347 ntBASIC20.88■□□□□ 0.93
VWA3AA6NCI4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.88■□□□□ 0.93
VWA3AA6NCI4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms