Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 AL162741.1-201ENST00000565563 1558 ntBASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC162PA2VCL2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 AC135776.1-201ENST00000319817 2481 ntBASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 ESPNP-201ENST00000270691 2015 ntBASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 AC073912.3-201ENST00000624414 853 ntBASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC162PA2VCL2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 AC104390.1-201ENST00000555663 520 ntBASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC162PA2VCL2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
CCDC162PA2VCL2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC162PA2VCL2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
CCDC162PA2VCL2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC162PA2VCL2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms