Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF103-CHMP3A0A140T963 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF103-CHMP3A0A140T963 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF103-CHMP3A0A140T963 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RNF103-CHMP3A0A140T963 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF103-CHMP3A0A140T963 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.77■□□□□ 0.44
RNF103-CHMP3A0A140T963 HTR7P1-201ENST00000538670 1336 ntBASIC17.77■□□□□ 0.44
RNF103-CHMP3A0A140T963 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF103-CHMP3A0A140T963 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
RNF103-CHMP3A0A140T963 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF103-CHMP3A0A140T963 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF103-CHMP3A0A140T963 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RNF103-CHMP3A0A140T963 AC008764.6-201ENST00000595909 2069 ntBASIC17.77■□□□□ 0.44
RNF103-CHMP3A0A140T963 POU5F1P3-201ENST00000428824 1078 ntBASIC17.77■□□□□ 0.44
RNF103-CHMP3A0A140T963 AC004980.1-204ENST00000429707 299 ntBASIC17.77■□□□□ 0.44
RNF103-CHMP3A0A140T963 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RNF103-CHMP3A0A140T963 C1QBPP2-201ENST00000528754 825 ntBASIC17.77■□□□□ 0.44
RNF103-CHMP3A0A140T963 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF103-CHMP3A0A140T963 MIR4651-201ENST00000582622 73 ntBASIC17.77■□□□□ 0.44
RNF103-CHMP3A0A140T963 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF103-CHMP3A0A140T963 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.77■□□□□ 0.43
RNF103-CHMP3A0A140T963 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.43
RNF103-CHMP3A0A140T963 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.77■□□□□ 0.43
RNF103-CHMP3A0A140T963 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.77■□□□□ 0.43
RNF103-CHMP3A0A140T963 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF103-CHMP3A0A140T963 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RNF103-CHMP3A0A140T963 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF103-CHMP3A0A140T963 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF103-CHMP3A0A140T963 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF103-CHMP3A0A140T963 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 PRORSD1P-202ENST00000563365 2154 ntBASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 KRT8P11-201ENST00000409686 1436 ntBASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF103-CHMP3A0A140T963 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 AL162741.1-201ENST00000565563 1558 ntBASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 AC073592.3-201ENST00000625118 1834 ntBASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 ESPNP-201ENST00000270691 2015 ntBASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RNF103-CHMP3A0A140T963 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms