Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 MIR1238-201ENST00000408483 83 ntBASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 CA15P1-201ENST00000481698 905 ntBASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 AP005242.2-201ENST00000580065 1175 ntBASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 AC008622.2-201ENST00000617006 1229 ntBASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 AL109659.2-201ENST00000606809 1674 ntBASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRGV1A0A0A0MS02 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 AC112777.1-201ENST00000540175 1423 ntBASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 AL023284.2-201ENST00000405850 579 ntBASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 AL390955.1-201ENST00000428694 934 ntBASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 GPAT2P1-201ENST00000444924 1672 ntBASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRGV1A0A0A0MS02 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TRGV1A0A0A0MS02 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms