Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRAV26-1A0A087WT03 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 C2orf69P3-201ENST00000565542 1120 ntBASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.36□□□□□ -0.27
TRAV26-1A0A087WT03 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 NAPSB-206ENST00000562112 1266 ntBASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 GAS2L1P1-201ENST00000420145 1480 ntBASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRAV26-1A0A087WT03 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 IRX1P1-201ENST00000438849 1838 ntBASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRAV26-1A0A087WT03 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms