Protein–RNA interactions for Protein: Q9P287

BCCIP, BRCA2 and CDKN1A-interacting protein, humanhuman

Known RBP eCLIP

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIPQ9P287 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.97■□□□□ 0.472e-7■■□□□ 13.5
BCCIPQ9P287 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.2■□□□□ 0.182e-7■■□□□ 13.5
BCCIPQ9P287 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC15.53■□□□□ 0.082e-7■■□□□ 13.5
BCCIPQ9P287 LARP4-208ENST00000520064 2068 ntTSL 513.91□□□□□ -0.182e-7■■□□□ 13.5
BCCIPQ9P287 ANKRD10-203ENST00000460846 535 ntTSL 313.62□□□□□ -0.232e-7■■□□□ 13.5
BCCIPQ9P287 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC13.28□□□□□ -0.282e-7■■□□□ 13.5
BCCIPQ9P287 LARP4-206ENST00000518444 2853 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.412e-7■■□□□ 13.5
BCCIPQ9P287 LARP4-204ENST00000429001 4000 ntTSL 5 BASIC11.53□□□□□ -0.562e-7■■□□□ 13.5
BCCIPQ9P287 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.412e-7■■□□□ 13.5
BCCIPQ9P287 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC6.03□□□□□ -1.442e-7■■□□□ 13.5
BCCIPQ9P287 TRRAP-203ENST00000417523 550 ntTSL 417.59■□□□□ 0.411e-12■■□□□ 13.5
BCCIPQ9P287 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.071e-12■■□□□ 13.5
BCCIPQ9P287 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.091e-12■■□□□ 13.5
BCCIPQ9P287 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.091e-12■■□□□ 13.5
BCCIPQ9P287 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.281e-12■■□□□ 13.5
BCCIPQ9P287 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC26.49■■□□□ 1.837e-7■■□□□ 13.4
BCCIPQ9P287 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC23.21■■□□□ 1.317e-7■■□□□ 13.4
BCCIPQ9P287 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.6■□□□□ 0.257e-7■■□□□ 13.4
BCCIPQ9P287 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC16.44■□□□□ 0.227e-7■■□□□ 13.4
BCCIPQ9P287 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.147e-7■■□□□ 13.4
BCCIPQ9P287 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC15.21■□□□□ 0.037e-7■■□□□ 13.4
BCCIPQ9P287 AFDN-207ENST00000400822 7593 ntTSL 5 BASIC12.68□□□□□ -0.387e-7■■□□□ 13.4
BCCIPQ9P287 AFDN-221ENST00000511637 5999 ntTSL 1 (best)11.8□□□□□ -0.527e-7■■□□□ 13.4
BCCIPQ9P287 AFDN-204ENST00000366809 4839 ntTSL 1 (best)11.33□□□□□ -0.67e-7■■□□□ 13.4
BCCIPQ9P287 SCARNA2-201ENST00000458748 420 ntBASIC18.26■□□□□ 0.511e-323■■□□□ 13.4
BCCIPQ9P287 AL356488.2-201ENST00000602755 427 ntBASIC18.02■□□□□ 0.481e-323■■□□□ 13.4
BCCIPQ9P287 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC26.8■■□□□ 1.881e-6■■□□□ 13.3
BCCIPQ9P287 ZCCHC2-202ENST00000585873 5652 ntTSL 1 (best)22.07■■□□□ 1.121e-6■■□□□ 13.3
BCCIPQ9P287 ZCCHC2-210ENST00000591632 608 ntTSL 319.18■□□□□ 0.661e-6■■□□□ 13.3
BCCIPQ9P287 ZCCHC2-211ENST00000621048 704 ntTSL 317.59■□□□□ 0.411e-6■■□□□ 13.3
BCCIPQ9P287 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.911e-6■■□□□ 13.3
BCCIPQ9P287 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.162e-6■■□□□ 13.3
BCCIPQ9P287 USP10-219ENST00000570191 2717 ntTSL 2 BASIC13.84□□□□□ -0.192e-6■■□□□ 13.3
BCCIPQ9P287 USP10-202ENST00000540269 3070 ntTSL 1 (best)13.48□□□□□ -0.252e-6■■□□□ 13.3
BCCIPQ9P287 USP10-207ENST00000563048 1315 ntTSL 212.6□□□□□ -0.392e-6■■□□□ 13.3
BCCIPQ9P287 HNRNPK-206ENST00000457156 1283 ntTSL 518.98■□□□□ 0.633e-7■■□□□ 13.2
BCCIPQ9P287 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.613e-7■■□□□ 13.2
BCCIPQ9P287 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.323e-7■■□□□ 13.2
BCCIPQ9P287 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.893e-7■■□□□ 13.2
BCCIPQ9P287 LINC01399-201ENST00000423311 648 ntTSL 3 BASIC9.08□□□□□ -0.963e-7■■□□□ 13.2
BCCIPQ9P287 HNRNPK-207ENST00000472778 822 ntTSL 36.51□□□□□ -1.373e-7■■□□□ 13.2
BCCIPQ9P287 HNRNPK-209ENST00000483135 900 ntTSL 26.51□□□□□ -1.373e-7■■□□□ 13.2
BCCIPQ9P287 MBTPS1-210ENST00000565863 597 ntTSL 421.94■■□□□ 1.14e-8■■□□□ 12.9
BCCIPQ9P287 MBTPS1-213ENST00000569770 763 ntTSL 320.93■□□□□ 0.944e-8■■□□□ 12.9
BCCIPQ9P287 MBTPS1-201ENST00000343411 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.254e-8■■□□□ 12.9
BCCIPQ9P287 MBTPS1-206ENST00000563231 546 ntTSL 59.9□□□□□ -0.824e-8■■□□□ 12.9
BCCIPQ9P287 MBTPS1-209ENST00000564643 602 ntTSL 38.88□□□□□ -0.994e-8■■□□□ 12.9
BCCIPQ9P287 TNRC6A-209ENST00000562829 277 ntTSL 217.68■□□□□ 0.426e-7■■□□□ 12.9
BCCIPQ9P287 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC9.35□□□□□ -0.916e-7■■□□□ 12.9
BCCIPQ9P287 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.066e-7■■□□□ 12.9
BCCIPQ9P287 SIN3B-205ENST00000595049 904 ntTSL 221.89■■□□□ 1.091e-8■■□□□ 12.6
BCCIPQ9P287 NKD1-202ENST00000564336 477 ntTSL 323.51■■□□□ 1.351e-6■■□□□ 12.5
BCCIPQ9P287 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.021e-6■■□□□ 12.5
BCCIPQ9P287 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC14.45□□□□□ -0.11e-6■■□□□ 12.5
BCCIPQ9P287 SECISBP2-209ENST00000534113 3584 ntTSL 2 BASIC11.74□□□□□ -0.531e-6■■□□□ 12.5
BCCIPQ9P287 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.661e-6■■□□□ 12.5
BCCIPQ9P287 SECISBP2-205ENST00000470305 5405 ntTSL 1 (best)10.31□□□□□ -0.761e-6■■□□□ 12.5
BCCIPQ9P287 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.147e-10■■□□□ 12.4
BCCIPQ9P287 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC28.36■■■□□ 2.137e-10■■□□□ 12.4
BCCIPQ9P287 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.53■■■□□ 27e-10■■□□□ 12.4
BCCIPQ9P287 FTCD-212ENST00000498355 1936 ntTSL 227.39■■□□□ 1.977e-10■■□□□ 12.4
BCCIPQ9P287 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.837e-10■■□□□ 12.4
BCCIPQ9P287 FTCD-210ENST00000488577 447 ntTSL 320.17■□□□□ 0.827e-10■■□□□ 12.4
BCCIPQ9P287 MIR3609-201ENST00000582661 80 ntBASIC4.23□□□□□ -1.734e-12■■□□□ 12.4
BCCIPQ9P287 BRD2-204ENST00000449025 3210 ntAPPRIS ALT2 TSL 1 (best)14.86□□□□□ -0.031e-6■■□□□ 12.4
BCCIPQ9P287 BRD2-205ENST00000449085 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.031e-6■■□□□ 12.4
BCCIPQ9P287 RBM33-209ENST00000440108 1027 ntTSL 518.43■□□□□ 0.544e-8■■□□□ 12.3
BCCIPQ9P287 RBM33-210ENST00000486747 559 ntTSL 317.85■□□□□ 0.454e-8■■□□□ 12.3
BCCIPQ9P287 RBM33-206ENST00000392761 2934 ntTSL 215.39■□□□□ 0.054e-8■■□□□ 12.3
BCCIPQ9P287 RBM33-202ENST00000307403 4360 ntTSL 211.61□□□□□ -0.554e-8■■□□□ 12.3
BCCIPQ9P287 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.689e-7■■□□□ 12.3
BCCIPQ9P287 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.459e-7■■□□□ 12.3
BCCIPQ9P287 BRD2-213ENST00000495733 3404 ntTSL 217.18■□□□□ 0.349e-7■■□□□ 12.3
BCCIPQ9P287 BRD2-212ENST00000482914 4834 ntTSL 1 (best)15.97■□□□□ 0.159e-7■■□□□ 12.3
BCCIPQ9P287 BRD2-206ENST00000456339 887 ntTSL 415.9■□□□□ 0.149e-7■■□□□ 12.3
BCCIPQ9P287 BRD2-219ENST00000607833 2338 ntAPPRIS ALT2 TSL 1 (best)15.4■□□□□ 0.069e-7■■□□□ 12.3
BCCIPQ9P287 BRD2-203ENST00000395287 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.719e-7■■□□□ 12.3
BCCIPQ9P287 PRKAR1A-216ENST00000589017 1116 ntTSL 319.42■□□□□ 0.71e-6■■□□□ 12.2
BCCIPQ9P287 PRKAR1A-201ENST00000358598 3576 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.51e-6■■□□□ 12.2
BCCIPQ9P287 AC007780.1-201ENST00000590353 719 ntTSL 49.36□□□□□ -0.911e-6■■□□□ 12.2
BCCIPQ9P287 APLP2-208ENST00000526330 582 ntTSL 321.99■■□□□ 1.112e-6■■□□□ 12.2
BCCIPQ9P287 APLP2-209ENST00000527702 579 ntTSL 421.99■■□□□ 1.112e-6■■□□□ 12.2
BCCIPQ9P287 APLP2-213ENST00000529701 573 ntTSL 521.99■■□□□ 1.112e-6■■□□□ 12.2
BCCIPQ9P287 APLP2-214ENST00000530132 542 ntTSL 421.99■■□□□ 1.112e-6■■□□□ 12.2
BCCIPQ9P287 APLP2-217ENST00000533195 560 ntTSL 421.99■■□□□ 1.112e-6■■□□□ 12.2
BCCIPQ9P287 APLP2-218ENST00000533532 584 ntTSL 221.99■■□□□ 1.112e-6■■□□□ 12.2
BCCIPQ9P287 APLP2-220ENST00000533618 574 ntTSL 421.99■■□□□ 1.112e-6■■□□□ 12.2
BCCIPQ9P287 APLP2-221ENST00000533713 560 ntTSL 421.99■■□□□ 1.112e-6■■□□□ 12.2
BCCIPQ9P287 APLP2-223ENST00000534001 585 ntTSL 421.99■■□□□ 1.112e-6■■□□□ 12.2
BCCIPQ9P287 APLP2-224ENST00000534582 556 ntTSL 521.99■■□□□ 1.112e-6■■□□□ 12.2
BCCIPQ9P287 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.6■□□□□ 0.892e-6■■□□□ 12.2
BCCIPQ9P287 APLP2-216ENST00000532456 664 ntTSL 420.52■□□□□ 0.882e-6■■□□□ 12.2
BCCIPQ9P287 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.08■□□□□ 0.82e-6■■□□□ 12.2
BCCIPQ9P287 APLP2-219ENST00000533616 2041 ntTSL 219.47■□□□□ 0.712e-6■■□□□ 12.2
BCCIPQ9P287 APLP2-225ENST00000534761 551 ntTSL 517.67■□□□□ 0.422e-6■■□□□ 12.2
BCCIPQ9P287 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.142e-6■■□□□ 12.2
BCCIPQ9P287 APLP2-211ENST00000529235 537 ntTSL 415.33■□□□□ 0.042e-6■■□□□ 12.2
BCCIPQ9P287 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -02e-6■■□□□ 12.2
BCCIPQ9P287 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.072e-6■■□□□ 12.2
BCCIPQ9P287 USP10-214ENST00000567526 330 ntTSL 37.72□□□□□ -1.172e-9■■□□□ 12.2
Retrieved 100 of 1,347 protein–RNA pairs in 38.8 ms