RNA–Protein interactions for RNA: ENST00000470305.1

SECISBP2-205, Transcript of SECIS binding protein 2, humanhuman

TSL 1 (best)

Gene SECISBP2, Length 5,405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SECISBP2-205ENST00000470305 NISCHQ9Y2I1 1504 aa15.61■□□□□ 0.09
SECISBP2-205ENST00000470305 MYT1Q01538 1121 aa14.51□□□□□ -0.09
SECISBP2-205ENST00000470305 PELP1Q8IZL8 1130 aaKnown RBP14.43□□□□□ -0.1
SECISBP2-205ENST00000470305 DCAF8L2P0C7V8 631 aa14.31□□□□□ -0.12
SECISBP2-205ENST00000470305 ERICH6Q7L0X2 663 aa13.87□□□□□ -0.19
SECISBP2-205ENST00000470305 CCER1Q8TC90 406 aaPredicted RBP13.69□□□□□ -0.22
SECISBP2-205ENST00000470305 TTBK1Q5TCY1 1321 aaPredicted RBP13.62□□□□□ -0.23
SECISBP2-205ENST00000470305 CENPBP07199 599 aaPredicted RBP13.62□□□□□ -0.23
SECISBP2-205ENST00000470305 CCDC180Q9P1Z9 1646 aa13.6□□□□□ -0.23
SECISBP2-205ENST00000470305 ABCC9O60706 1549 aa13.59□□□□□ -0.23
SECISBP2-205ENST00000470305 YTHDC1Q96MU7 727 aaKnown RBP13.26□□□□□ -0.29
SECISBP2-205ENST00000470305 SHROOM4Q9ULL8 1493 aa13.18□□□□□ -0.3
SECISBP2-205ENST00000470305 ZEB1P37275 1124 aaPredicted RBP13.16□□□□□ -0.3
SECISBP2-205ENST00000470305 NEFLP07196 543 aa13.15□□□□□ -0.3
SECISBP2-205ENST00000470305 RB1CC1Q8TDY2 1594 aa13.11□□□□□ -0.31
SECISBP2-205ENST00000470305 PCGF6Q9BYE7 350 aa13.11□□□□□ -0.31
SECISBP2-205ENST00000470305 NACADO15069 1562 aa13.03□□□□□ -0.32
SECISBP2-205ENST00000470305 SUPT5HO00267 1087 aaKnown RBP13.03□□□□□ -0.32
SECISBP2-205ENST00000470305 PABPN1Q86U42 306 aaKnown RBP eCLIP12.96□□□□□ -0.33
SECISBP2-205ENST00000470305 ZCCHC6Q5VYS8 1495 aaKnown RBP12.94□□□□□ -0.34
SECISBP2-205ENST00000470305 RTL5Q5HYW3 569 aaPredicted RBP12.91□□□□□ -0.34
SECISBP2-205ENST00000470305 DAXXQ9UER7 740 aaPredicted RBP12.91□□□□□ -0.34
SECISBP2-205ENST00000470305 EHMT2Q96KQ7 1210 aa12.8□□□□□ -0.36
SECISBP2-205ENST00000470305 DCAF1Q9Y4B6 1507 aa12.8□□□□□ -0.36
SECISBP2-205ENST00000470305 APLP2Q06481 763 aa12.78□□□□□ -0.36
SECISBP2-205ENST00000470305 MYO15BQ96JP2 1530 aa12.75□□□□□ -0.37
SECISBP2-205ENST00000470305 GLIPR1L2Q4G1C9 344 aa12.73□□□□□ -0.37
SECISBP2-205ENST00000470305 SCRIBQ14160 1630 aa12.72□□□□□ -0.37
SECISBP2-205ENST00000470305 HRCP23327 699 aa12.7□□□□□ -0.38
SECISBP2-205ENST00000470305 EIF5BO60841 1220 aaKnown RBP12.66□□□□□ -0.38
SECISBP2-205ENST00000470305 FAM9AQ8IZU1 332 aaPredicted RBP12.59□□□□□ -0.39
SECISBP2-205ENST00000470305 ZNF316A6NFI3 1004 aaPredicted RBP12.59□□□□□ -0.39
SECISBP2-205ENST00000470305 GTF3C3Q9Y5Q9 886 aa12.47□□□□□ -0.41
SECISBP2-205ENST00000470305 MYT1LQ9UL68 1186 aa12.38□□□□□ -0.43
SECISBP2-205ENST00000470305 TRIM26Q12899 539 aaPredicted RBP12.34□□□□□ -0.43
SECISBP2-205ENST00000470305 PPARGC1BQ86YN6 1023 aaKnown RBP12.32□□□□□ -0.44
SECISBP2-205ENST00000470305 CDK11AQ9UQ88 783 aaPredicted RBP12.32□□□□□ -0.44
SECISBP2-205ENST00000470305 RANGAP1P46060 587 aaPredicted RBP12.29□□□□□ -0.44
SECISBP2-205ENST00000470305 DIEXFQ68CQ4 756 aaKnown RBP12.29□□□□□ -0.44
SECISBP2-205ENST00000470305 BAZ1AQ9NRL2 1556 aaPredicted RBP12.29□□□□□ -0.44
SECISBP2-205ENST00000470305 CLSPNQ9HAW4 1339 aa12.28□□□□□ -0.44
SECISBP2-205ENST00000470305 BAZ1BQ9UIG0 1483 aaKnown RBP12.26□□□□□ -0.45
SECISBP2-205ENST00000470305 BCANQ96GW7 911 aa12.26□□□□□ -0.45
SECISBP2-205ENST00000470305 TRIM41Q8WV44 630 aa12.24□□□□□ -0.45
SECISBP2-205ENST00000470305 SMARCA2P51531 1590 aa12.23□□□□□ -0.45
SECISBP2-205ENST00000470305 ACIN1Q9UKV3 1341 aaKnown RBP12.22□□□□□ -0.45
SECISBP2-205ENST00000470305 CECR2Q9BXF3 1484 aa12.2□□□□□ -0.46
SECISBP2-205ENST00000470305 ANP32AP39687 249 aaKnown RBP12.18□□□□□ -0.46
SECISBP2-205ENST00000470305 ERCC6Q03468 1493 aa12.16□□□□□ -0.46
SECISBP2-205ENST00000470305 ANP32BQ92688 251 aaKnown RBP12.11□□□□□ -0.47
SECISBP2-205ENST00000470305 BCL11AQ9H165 835 aa12.11□□□□□ -0.47
SECISBP2-205ENST00000470305 TNNT2P45379 298 aaPredicted RBP12.08□□□□□ -0.47
SECISBP2-205ENST00000470305 RSF1Q96T23 1441 aaPredicted RBP12.05□□□□□ -0.48
SECISBP2-205ENST00000470305 PDS5BQ9NTI5 1447 aa12.05□□□□□ -0.48
SECISBP2-205ENST00000470305 EIF4G1Q04637 1599 aaKnown RBP12.05□□□□□ -0.48
SECISBP2-205ENST00000470305 ANP32EQ9BTT0 268 aa12.01□□□□□ -0.49
SECISBP2-205ENST00000470305 ATAD2BQ9ULI0 1458 aa12□□□□□ -0.49
SECISBP2-205ENST00000470305 POLR3GLQ9BT43 218 aa12□□□□□ -0.49
SECISBP2-205ENST00000470305 NBR1Q14596 966 aa11.99□□□□□ -0.49
SECISBP2-205ENST00000470305 SMARCA4P51532 1647 aa11.99□□□□□ -0.49
SECISBP2-205ENST00000470305 CDK11BP21127 795 aaKnown RBP11.98□□□□□ -0.49
SECISBP2-205ENST00000470305 UBTFP17480 764 aaKnown RBP11.97□□□□□ -0.49
SECISBP2-205ENST00000470305 FBLN2P98095 1184 aa11.97□□□□□ -0.49
SECISBP2-205ENST00000470305 NCAPD3P42695 1498 aa11.96□□□□□ -0.5
SECISBP2-205ENST00000470305 NPM2Q86SE8 214 aaKnown RBP11.96□□□□□ -0.5
SECISBP2-205ENST00000470305 BICRAQ9NZM4 1560 aa11.94□□□□□ -0.5
SECISBP2-205ENST00000470305 CC2D2AQ9P2K1 1620 aa11.93□□□□□ -0.5
SECISBP2-205ENST00000470305 MROH2BQ7Z745 1585 aa11.93□□□□□ -0.5
SECISBP2-205ENST00000470305 CNGB1Q14028 1251 aaPredicted RBP11.92□□□□□ -0.5
SECISBP2-205ENST00000470305 ATP1B4Q9UN42 357 aaPredicted RBP11.91□□□□□ -0.5
SECISBP2-205ENST00000470305 CADPSQ9ULU8 1353 aa11.89□□□□□ -0.51
SECISBP2-205ENST00000470305 SCAF1Q9H7N4 1312 aaKnown RBP11.89□□□□□ -0.51
SECISBP2-205ENST00000470305 ZBTB47Q9UFB7 747 aaPredicted RBP11.89□□□□□ -0.51
SECISBP2-205ENST00000470305 TOP2AP11388 1531 aaKnown RBP11.88□□□□□ -0.51
SECISBP2-205ENST00000470305 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.87□□□□□ -0.51
SECISBP2-205ENST00000470305 TRIM44Q96DX7 344 aaPredicted RBP11.86□□□□□ -0.51
SECISBP2-205ENST00000470305 NCLP19338 710 aaKnown RBP11.85□□□□□ -0.51
SECISBP2-205ENST00000470305 ERICH6BQ5W0A0 696 aa11.85□□□□□ -0.51
SECISBP2-205ENST00000470305 HMGXB3Q12766 1538 aa11.84□□□□□ -0.51
SECISBP2-205ENST00000470305 FKBP8Q14318 412 aa11.82□□□□□ -0.52
SECISBP2-205ENST00000470305 CHMP7Q8WUX9 453 aaPredicted RBP11.82□□□□□ -0.52
SECISBP2-205ENST00000470305 UNC13AQ9UPW8 1703 aa11.82□□□□□ -0.52
SECISBP2-205ENST00000470305 ANP32CO43423 234 aa11.81□□□□□ -0.52
SECISBP2-205ENST00000470305 RTN4Q9NQC3 1192 aaKnown RBP11.81□□□□□ -0.52
SECISBP2-205ENST00000470305 CEP164Q9UPV0 1460 aa11.8□□□□□ -0.52
SECISBP2-205ENST00000470305 HNRNPUL2Q1KMD3 747 aaKnown RBP11.8□□□□□ -0.52
SECISBP2-205ENST00000470305 ABCC8Q09428 1581 aa11.8□□□□□ -0.52
SECISBP2-205ENST00000470305 NAP1L5Q96NT1 182 aaPredicted RBP11.8□□□□□ -0.52
SECISBP2-205ENST00000470305 ARXQ96QS3 562 aa11.79□□□□□ -0.52
SECISBP2-205ENST00000470305 NPM1P06748 294 aaKnown RBP eCLIP11.77□□□□□ -0.53
SECISBP2-205ENST00000470305 NEUROD1Q13562 356 aa11.77□□□□□ -0.53
SECISBP2-205ENST00000470305 DNAJC5BQ9UF47 199 aa11.77□□□□□ -0.53
SECISBP2-205ENST00000470305 CCDC88BA6NC98 1476 aa11.75□□□□□ -0.53
SECISBP2-205ENST00000470305 WIZO95785 1651 aa11.75□□□□□ -0.53
SECISBP2-205ENST00000470305 HSP90AA1P07900 732 aaKnown RBP11.75□□□□□ -0.53
SECISBP2-205ENST00000470305 AMER1Q5JTC6 1135 aaPredicted RBP11.75□□□□□ -0.53
SECISBP2-205ENST00000470305 NEFMP07197 916 aa11.74□□□□□ -0.53
SECISBP2-205ENST00000470305 ITGAEP38570 1179 aa11.73□□□□□ -0.53
SECISBP2-205ENST00000470305 WRNQ14191 1432 aaPredicted RBP eCLIP11.73□□□□□ -0.53
SECISBP2-205ENST00000470305 FANCD2Q9BXW9 1451 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms