Protein–RNA interactions for Protein: Q9NTX7

RNF146, E3 ubiquitin-protein ligase RNF146, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF146Q9NTX7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
RNF146Q9NTX7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC28.72■■■□□ 2.19
RNF146Q9NTX7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
RNF146Q9NTX7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
RNF146Q9NTX7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
RNF146Q9NTX7 AL033527.3-201ENST00000566366 1196 ntBASIC28.71■■■□□ 2.19
RNF146Q9NTX7 AC007029.1-201ENST00000604183 313 ntBASIC28.71■■■□□ 2.19
RNF146Q9NTX7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
RNF146Q9NTX7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
RNF146Q9NTX7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC28.71■■■□□ 2.19
RNF146Q9NTX7 REST-210ENST00000638187 1334 ntTSL 5 BASIC28.7■■■□□ 2.19
RNF146Q9NTX7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
RNF146Q9NTX7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC28.7■■■□□ 2.19
RNF146Q9NTX7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
RNF146Q9NTX7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
RNF146Q9NTX7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.7■■■□□ 2.18
RNF146Q9NTX7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
RNF146Q9NTX7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC28.7■■■□□ 2.18
RNF146Q9NTX7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC28.7■■■□□ 2.18
RNF146Q9NTX7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
RNF146Q9NTX7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
RNF146Q9NTX7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
RNF146Q9NTX7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC28.69■■■□□ 2.18
RNF146Q9NTX7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.67■■■□□ 2.18
RNF146Q9NTX7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
RNF146Q9NTX7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
RNF146Q9NTX7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
RNF146Q9NTX7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
RNF146Q9NTX7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
RNF146Q9NTX7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC28.66■■■□□ 2.18
RNF146Q9NTX7 SMPD5-203ENST00000639008 1464 ntBASIC28.66■■■□□ 2.18
RNF146Q9NTX7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC28.65■■■□□ 2.18
RNF146Q9NTX7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
RNF146Q9NTX7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RNF146Q9NTX7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC28.63■■■□□ 2.17
RNF146Q9NTX7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RNF146Q9NTX7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC28.63■■■□□ 2.17
RNF146Q9NTX7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RNF146Q9NTX7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RNF146Q9NTX7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC28.63■■■□□ 2.17
RNF146Q9NTX7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
RNF146Q9NTX7 AC004987.1-201ENST00000428627 508 ntBASIC28.62■■■□□ 2.17
RNF146Q9NTX7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC28.62■■■□□ 2.17
RNF146Q9NTX7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
RNF146Q9NTX7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
RNF146Q9NTX7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
RNF146Q9NTX7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.61■■■□□ 2.17
RNF146Q9NTX7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
RNF146Q9NTX7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
RNF146Q9NTX7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC28.6■■■□□ 2.17
RNF146Q9NTX7 AC009831.1-201ENST00000580420 1582 ntBASIC28.6■■■□□ 2.17
RNF146Q9NTX7 TSPY13P-201ENST00000338964 914 ntBASIC28.6■■■□□ 2.17
RNF146Q9NTX7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
RNF146Q9NTX7 ATP5G2P3-201ENST00000429083 425 ntBASIC28.6■■■□□ 2.17
RNF146Q9NTX7 AC025884.2-201ENST00000553429 711 ntBASIC28.6■■■□□ 2.17
RNF146Q9NTX7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
RNF146Q9NTX7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC28.59■■■□□ 2.17
RNF146Q9NTX7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
RNF146Q9NTX7 GFER-205ENST00000569451 517 ntTSL 5 BASIC28.59■■■□□ 2.17
RNF146Q9NTX7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC28.59■■■□□ 2.17
RNF146Q9NTX7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
RNF146Q9NTX7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
RNF146Q9NTX7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC28.58■■■□□ 2.17
RNF146Q9NTX7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
RNF146Q9NTX7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
RNF146Q9NTX7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC28.57■■■□□ 2.16
RNF146Q9NTX7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
RNF146Q9NTX7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
RNF146Q9NTX7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
RNF146Q9NTX7 AC133552.2-201ENST00000619106 1032 ntBASIC28.57■■■□□ 2.16
RNF146Q9NTX7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC28.57■■■□□ 2.16
RNF146Q9NTX7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
RNF146Q9NTX7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
RNF146Q9NTX7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
RNF146Q9NTX7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
RNF146Q9NTX7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
RNF146Q9NTX7 AL592293.1-201ENST00000502889 1188 ntBASIC28.56■■■□□ 2.16
RNF146Q9NTX7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
RNF146Q9NTX7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
RNF146Q9NTX7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
RNF146Q9NTX7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
RNF146Q9NTX7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
RNF146Q9NTX7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
RNF146Q9NTX7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
RNF146Q9NTX7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
RNF146Q9NTX7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
RNF146Q9NTX7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC28.53■■■□□ 2.16
RNF146Q9NTX7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC28.53■■■□□ 2.16
RNF146Q9NTX7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
RNF146Q9NTX7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
RNF146Q9NTX7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
RNF146Q9NTX7 AC026202.3-201ENST00000600805 1127 ntBASIC28.52■■■□□ 2.16
RNF146Q9NTX7 AC129492.7-201ENST00000622992 756 ntBASIC28.52■■■□□ 2.16
RNF146Q9NTX7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC28.51■■■□□ 2.16
RNF146Q9NTX7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.16
RNF146Q9NTX7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
RNF146Q9NTX7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC28.51■■■□□ 2.15
RNF146Q9NTX7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
RNF146Q9NTX7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
RNF146Q9NTX7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC28.51■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms