Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Q9N2K0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Q9N2K0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Q9N2K0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.81■□□□□ 0.92
Q9N2K0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Q9N2K0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.81■□□□□ 0.92
Q9N2K0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Q9N2K0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.8■□□□□ 0.92
Q9N2K0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Q9N2K0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Q9N2K0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Q9N2K0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Q9N2K0 AC110285.7-201ENST00000624417 1536 ntBASIC20.79■□□□□ 0.92
Q9N2K0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Q9N2K0 AC145676.1-201ENST00000514988 2004 ntBASIC20.79■□□□□ 0.92
Q9N2K0 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.79■□□□□ 0.92
Q9N2K0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.79■□□□□ 0.92
Q9N2K0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Q9N2K0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Q9N2K0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.78■□□□□ 0.92
Q9N2K0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.78■□□□□ 0.92
Q9N2K0 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Q9N2K0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Q9N2K0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Q9N2K0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
Q9N2K0 AP004609.3-201ENST00000610705 1884 ntBASIC20.77■□□□□ 0.92
Q9N2K0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.77■□□□□ 0.91
Q9N2K0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Q9N2K0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.76■□□□□ 0.91
Q9N2K0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q9N2K0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.76■□□□□ 0.91
Q9N2K0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q9N2K0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.76■□□□□ 0.91
Q9N2K0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.76■□□□□ 0.91
Q9N2K0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Q9N2K0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Q9N2K0 AL162393.1-201ENST00000437852 946 ntBASIC20.76■□□□□ 0.91
Q9N2K0 AC044849.2-201ENST00000606596 710 ntBASIC20.76■□□□□ 0.91
Q9N2K0 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Q9N2K0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Q9N2K0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Q9N2K0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.75■□□□□ 0.91
Q9N2K0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Q9N2K0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Q9N2K0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.74■□□□□ 0.91
Q9N2K0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Q9N2K0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Q9N2K0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Q9N2K0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.74■□□□□ 0.91
Q9N2K0 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Q9N2K0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Q9N2K0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Q9N2K0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Q9N2K0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Q9N2K0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.72■□□□□ 0.91
Q9N2K0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Q9N2K0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Q9N2K0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Q9N2K0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Q9N2K0 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Q9N2K0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q9N2K0 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.7■□□□□ 0.9
Q9N2K0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Q9N2K0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q9N2K0 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Q9N2K0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Q9N2K0 AC092803.2-201ENST00000564287 1899 ntBASIC20.69■□□□□ 0.9
Q9N2K0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q9N2K0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Q9N2K0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Q9N2K0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.68■□□□□ 0.9
Q9N2K0 AC142472.1-201ENST00000612013 1741 ntBASIC20.67■□□□□ 0.9
Q9N2K0 DUSP8P4-201ENST00000399538 1761 ntBASIC20.67■□□□□ 0.9
Q9N2K0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q9N2K0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q9N2K0 AC021231.2-201ENST00000594613 730 ntBASIC20.67■□□□□ 0.9
Q9N2K0 WHAMMP3-201ENST00000611636 1609 ntBASIC20.67■□□□□ 0.9
Q9N2K0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Q9N2K0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Q9N2K0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Q9N2K0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Q9N2K0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Q9N2K0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Q9N2K0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.65■□□□□ 0.9
Q9N2K0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.65■□□□□ 0.9
Q9N2K0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Q9N2K0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.65■□□□□ 0.9
Q9N2K0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Q9N2K0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Q9N2K0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.65■□□□□ 0.9
Q9N2K0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.65■□□□□ 0.9
Q9N2K0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q9N2K0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q9N2K0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Q9N2K0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Q9N2K0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Q9N2K0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
Q9N2K0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.63■□□□□ 0.89
Q9N2K0 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.63■□□□□ 0.89
Q9N2K0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms