Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH20Q9HBT6 MIR4449-201ENST00000578365 66 ntBASIC21.71■■□□□ 1.07
CDH20Q9HBT6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH20Q9HBT6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH20Q9HBT6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH20Q9HBT6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH20Q9HBT6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH20Q9HBT6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CDH20Q9HBT6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.7■■□□□ 1.06
CDH20Q9HBT6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
CDH20Q9HBT6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.7■■□□□ 1.06
CDH20Q9HBT6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH20Q9HBT6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH20Q9HBT6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDH20Q9HBT6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.69■■□□□ 1.06
CDH20Q9HBT6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.69■■□□□ 1.06
CDH20Q9HBT6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH20Q9HBT6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH20Q9HBT6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH20Q9HBT6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDH20Q9HBT6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.68■■□□□ 1.06
CDH20Q9HBT6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH20Q9HBT6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH20Q9HBT6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDH20Q9HBT6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.67■■□□□ 1.06
CDH20Q9HBT6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.66■■□□□ 1.06
CDH20Q9HBT6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH20Q9HBT6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH20Q9HBT6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH20Q9HBT6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH20Q9HBT6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH20Q9HBT6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.66■■□□□ 1.06
CDH20Q9HBT6 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH20Q9HBT6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDH20Q9HBT6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDH20Q9HBT6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
CDH20Q9HBT6 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH20Q9HBT6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.66■■□□□ 1.06
CDH20Q9HBT6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.65■■□□□ 1.06
CDH20Q9HBT6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH20Q9HBT6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDH20Q9HBT6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH20Q9HBT6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH20Q9HBT6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH20Q9HBT6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDH20Q9HBT6 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH20Q9HBT6 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CDH20Q9HBT6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH20Q9HBT6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDH20Q9HBT6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.63■■□□□ 1.05
CDH20Q9HBT6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CDH20Q9HBT6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH20Q9HBT6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH20Q9HBT6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CDH20Q9HBT6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDH20Q9HBT6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDH20Q9HBT6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CDH20Q9HBT6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.61■■□□□ 1.05
CDH20Q9HBT6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.61■■□□□ 1.05
CDH20Q9HBT6 AC126177.7-201ENST00000547904 679 ntBASIC21.61■■□□□ 1.05
CDH20Q9HBT6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDH20Q9HBT6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.6■■□□□ 1.05
CDH20Q9HBT6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.6■■□□□ 1.05
CDH20Q9HBT6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDH20Q9HBT6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.6■■□□□ 1.05
CDH20Q9HBT6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDH20Q9HBT6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDH20Q9HBT6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.59■■□□□ 1.05
CDH20Q9HBT6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDH20Q9HBT6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CDH20Q9HBT6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.59■■□□□ 1.05
CDH20Q9HBT6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDH20Q9HBT6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDH20Q9HBT6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDH20Q9HBT6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
CDH20Q9HBT6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDH20Q9HBT6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDH20Q9HBT6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDH20Q9HBT6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDH20Q9HBT6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDH20Q9HBT6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CDH20Q9HBT6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.56■■□□□ 1.04
CDH20Q9HBT6 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDH20Q9HBT6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.56■■□□□ 1.04
CDH20Q9HBT6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CDH20Q9HBT6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDH20Q9HBT6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH20Q9HBT6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.55■■□□□ 1.04
CDH20Q9HBT6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.55■■□□□ 1.04
CDH20Q9HBT6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH20Q9HBT6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.55■■□□□ 1.04
CDH20Q9HBT6 WHAMMP3-201ENST00000611636 1609 ntBASIC21.55■■□□□ 1.04
CDH20Q9HBT6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CDH20Q9HBT6 AL359258.2-201ENST00000564063 1566 ntBASIC21.54■■□□□ 1.04
CDH20Q9HBT6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.54■■□□□ 1.04
CDH20Q9HBT6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.54■■□□□ 1.04
CDH20Q9HBT6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH20Q9HBT6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.53■■□□□ 1.04
CDH20Q9HBT6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CDH20Q9HBT6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms