Protein–RNA interactions for Protein: Q9H7M6

ZSWIM4, Zinc finger SWIM domain-containing protein 4, humanhuman

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM4Q9H7M6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ZSWIM4Q9H7M6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
ZSWIM4Q9H7M6 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
ZSWIM4Q9H7M6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ZSWIM4Q9H7M6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.16■■■□□ 2.1
ZSWIM4Q9H7M6 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
ZSWIM4Q9H7M6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
ZSWIM4Q9H7M6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC28.15■■■□□ 2.1
ZSWIM4Q9H7M6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC28.15■■■□□ 2.1
ZSWIM4Q9H7M6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
ZSWIM4Q9H7M6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.15■■■□□ 2.1
ZSWIM4Q9H7M6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
ZSWIM4Q9H7M6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ZSWIM4Q9H7M6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
ZSWIM4Q9H7M6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC28.14■■■□□ 2.1
ZSWIM4Q9H7M6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.14■■■□□ 2.1
ZSWIM4Q9H7M6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
ZSWIM4Q9H7M6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.09
ZSWIM4Q9H7M6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC28.13■■■□□ 2.09
ZSWIM4Q9H7M6 AC018358.1-201ENST00000631079 1402 ntBASIC28.13■■■□□ 2.09
ZSWIM4Q9H7M6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ZSWIM4Q9H7M6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ZSWIM4Q9H7M6 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ZSWIM4Q9H7M6 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC28.12■■■□□ 2.09
ZSWIM4Q9H7M6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
ZSWIM4Q9H7M6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ZSWIM4Q9H7M6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
ZSWIM4Q9H7M6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC28.12■■■□□ 2.09
ZSWIM4Q9H7M6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC28.11■■■□□ 2.09
ZSWIM4Q9H7M6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC28.11■■■□□ 2.09
ZSWIM4Q9H7M6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ZSWIM4Q9H7M6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
ZSWIM4Q9H7M6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.1■■■□□ 2.09
ZSWIM4Q9H7M6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC28.1■■■□□ 2.09
ZSWIM4Q9H7M6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC28.09■■■□□ 2.09
ZSWIM4Q9H7M6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC28.09■■■□□ 2.09
ZSWIM4Q9H7M6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
ZSWIM4Q9H7M6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ZSWIM4Q9H7M6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.09■■■□□ 2.09
ZSWIM4Q9H7M6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
ZSWIM4Q9H7M6 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.09■■■□□ 2.09
ZSWIM4Q9H7M6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
ZSWIM4Q9H7M6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
ZSWIM4Q9H7M6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
ZSWIM4Q9H7M6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28.08■■■□□ 2.09
ZSWIM4Q9H7M6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
ZSWIM4Q9H7M6 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ZSWIM4Q9H7M6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC28.07■■■□□ 2.08
ZSWIM4Q9H7M6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ZSWIM4Q9H7M6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
ZSWIM4Q9H7M6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
ZSWIM4Q9H7M6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC28.06■■■□□ 2.08
ZSWIM4Q9H7M6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
ZSWIM4Q9H7M6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
ZSWIM4Q9H7M6 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
ZSWIM4Q9H7M6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
ZSWIM4Q9H7M6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC28.04■■■□□ 2.08
ZSWIM4Q9H7M6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
ZSWIM4Q9H7M6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
ZSWIM4Q9H7M6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
ZSWIM4Q9H7M6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
ZSWIM4Q9H7M6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
ZSWIM4Q9H7M6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
ZSWIM4Q9H7M6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
ZSWIM4Q9H7M6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
ZSWIM4Q9H7M6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.02■■■□□ 2.08
ZSWIM4Q9H7M6 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.02■■■□□ 2.08
ZSWIM4Q9H7M6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
ZSWIM4Q9H7M6 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC28.02■■■□□ 2.08
ZSWIM4Q9H7M6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
ZSWIM4Q9H7M6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
ZSWIM4Q9H7M6 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
ZSWIM4Q9H7M6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.07
ZSWIM4Q9H7M6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.01■■■□□ 2.07
ZSWIM4Q9H7M6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC28■■■□□ 2.07
ZSWIM4Q9H7M6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC28■■■□□ 2.07
ZSWIM4Q9H7M6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC28■■■□□ 2.07
ZSWIM4Q9H7M6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
ZSWIM4Q9H7M6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
ZSWIM4Q9H7M6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
ZSWIM4Q9H7M6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC27.99■■■□□ 2.07
ZSWIM4Q9H7M6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC27.98■■■□□ 2.07
ZSWIM4Q9H7M6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC27.98■■■□□ 2.07
ZSWIM4Q9H7M6 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
ZSWIM4Q9H7M6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
ZSWIM4Q9H7M6 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC27.98■■■□□ 2.07
ZSWIM4Q9H7M6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC27.97■■■□□ 2.07
ZSWIM4Q9H7M6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC27.96■■■□□ 2.07
ZSWIM4Q9H7M6 LINC01003-201ENST00000564834 1764 ntBASIC27.96■■■□□ 2.07
ZSWIM4Q9H7M6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.07
ZSWIM4Q9H7M6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.95■■■□□ 2.07
ZSWIM4Q9H7M6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
ZSWIM4Q9H7M6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC27.95■■■□□ 2.06
ZSWIM4Q9H7M6 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
ZSWIM4Q9H7M6 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
ZSWIM4Q9H7M6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC27.94■■■□□ 2.06
ZSWIM4Q9H7M6 HSD17B1P1-201ENST00000590052 955 ntBASIC27.94■■■□□ 2.06
ZSWIM4Q9H7M6 MED25-210ENST00000612854 801 ntTSL 5 BASIC27.94■■■□□ 2.06
ZSWIM4Q9H7M6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
ZSWIM4Q9H7M6 MED25-214ENST00000622402 642 ntTSL 5 BASIC27.94■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms