Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.49■■■□□ 2.63
CHMP4BQ9H444 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC31.49■■■□□ 2.63
CHMP4BQ9H444 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CHMP4BQ9H444 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
CHMP4BQ9H444 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.48■■■□□ 2.63
CHMP4BQ9H444 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CHMP4BQ9H444 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CHMP4BQ9H444 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC31.47■■■□□ 2.63
CHMP4BQ9H444 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.47■■■□□ 2.63
CHMP4BQ9H444 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC31.46■■■□□ 2.63
CHMP4BQ9H444 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC31.45■■■□□ 2.63
CHMP4BQ9H444 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
CHMP4BQ9H444 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CHMP4BQ9H444 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
CHMP4BQ9H444 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CHMP4BQ9H444 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CHMP4BQ9H444 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC31.44■■■□□ 2.62
CHMP4BQ9H444 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CHMP4BQ9H444 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
CHMP4BQ9H444 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CHMP4BQ9H444 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC31.44■■■□□ 2.62
CHMP4BQ9H444 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CHMP4BQ9H444 AC148477.6-201ENST00000623746 465 ntBASIC31.43■■■□□ 2.62
CHMP4BQ9H444 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC31.43■■■□□ 2.62
CHMP4BQ9H444 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CHMP4BQ9H444 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC31.43■■■□□ 2.62
CHMP4BQ9H444 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CHMP4BQ9H444 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.42■■■□□ 2.62
CHMP4BQ9H444 WHAMMP3-201ENST00000611636 1609 ntBASIC31.42■■■□□ 2.62
CHMP4BQ9H444 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CHMP4BQ9H444 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
CHMP4BQ9H444 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CHMP4BQ9H444 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CHMP4BQ9H444 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.4■■■□□ 2.62
CHMP4BQ9H444 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC31.4■■■□□ 2.62
CHMP4BQ9H444 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CHMP4BQ9H444 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
CHMP4BQ9H444 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CHMP4BQ9H444 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC31.39■■■□□ 2.62
CHMP4BQ9H444 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CHMP4BQ9H444 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
CHMP4BQ9H444 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CHMP4BQ9H444 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC31.37■■■□□ 2.61
CHMP4BQ9H444 AL449106.1-201ENST00000608517 1980 ntBASIC31.37■■■□□ 2.61
CHMP4BQ9H444 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC31.35■■■□□ 2.61
CHMP4BQ9H444 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
CHMP4BQ9H444 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
CHMP4BQ9H444 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
CHMP4BQ9H444 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CHMP4BQ9H444 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CHMP4BQ9H444 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.34■■■□□ 2.61
CHMP4BQ9H444 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CHMP4BQ9H444 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CHMP4BQ9H444 CR559946.2-201ENST00000623684 991 ntBASIC31.34■■■□□ 2.61
CHMP4BQ9H444 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC31.34■■■□□ 2.61
CHMP4BQ9H444 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
CHMP4BQ9H444 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.33■■■□□ 2.61
CHMP4BQ9H444 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CHMP4BQ9H444 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CHMP4BQ9H444 CHST11-203ENST00000547956 936 ntTSL 2 BASIC31.32■■■□□ 2.6
CHMP4BQ9H444 MIR3648-2-201ENST00000581792 180 ntBASIC31.32■■■□□ 2.6
CHMP4BQ9H444 MIR3648-1-201ENST00000615959 180 ntBASIC31.32■■■□□ 2.6
CHMP4BQ9H444 MIR219A2-201ENST00000608502 1504 ntBASIC31.32■■■□□ 2.6
CHMP4BQ9H444 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CHMP4BQ9H444 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
CHMP4BQ9H444 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
CHMP4BQ9H444 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CHMP4BQ9H444 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC31.32■■■□□ 2.6
CHMP4BQ9H444 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC31.31■■■□□ 2.6
CHMP4BQ9H444 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.31■■■□□ 2.6
CHMP4BQ9H444 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
CHMP4BQ9H444 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
CHMP4BQ9H444 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC31.3■■■□□ 2.6
CHMP4BQ9H444 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC31.3■■■□□ 2.6
CHMP4BQ9H444 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC31.3■■■□□ 2.6
CHMP4BQ9H444 CREM-210ENST00000374721 2020 ntTSL 5 BASIC31.29■■■□□ 2.6
CHMP4BQ9H444 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHMP4BQ9H444 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHMP4BQ9H444 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
CHMP4BQ9H444 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CHMP4BQ9H444 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CHMP4BQ9H444 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHMP4BQ9H444 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CHMP4BQ9H444 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
CHMP4BQ9H444 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CHMP4BQ9H444 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.28■■■□□ 2.6
CHMP4BQ9H444 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CHMP4BQ9H444 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CHMP4BQ9H444 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC31.27■■■□□ 2.6
CHMP4BQ9H444 PKM-203ENST00000389093 2279 ntTSL 5 BASIC31.27■■■□□ 2.6
CHMP4BQ9H444 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CHMP4BQ9H444 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
CHMP4BQ9H444 HLA-V-202ENST00000446817 847 ntBASIC31.26■■■□□ 2.59
CHMP4BQ9H444 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
CHMP4BQ9H444 AP004609.3-201ENST00000610705 1884 ntBASIC31.26■■■□□ 2.59
CHMP4BQ9H444 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CHMP4BQ9H444 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
CHMP4BQ9H444 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CHMP4BQ9H444 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CHMP4BQ9H444 AC142472.1-201ENST00000612013 1741 ntBASIC31.25■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms