Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.94■□□□□ 0.141e-7■■■■■ 43.3
XRN2Q9H0D6 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC15.9■□□□□ 0.148e-8■■■■■ 43.3
XRN2Q9H0D6 RPL18-204ENST00000547897 440 ntTSL 515.78■□□□□ 0.128e-8■■■■■ 43.3
XRN2Q9H0D6 CALML4-201ENST00000354678 611 ntTSL 315.75■□□□□ 0.111e-7■■■■■ 43.3
XRN2Q9H0D6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.091e-7■■■■■ 43.3
XRN2Q9H0D6 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.091e-7■■■■■ 43.3
XRN2Q9H0D6 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.54■□□□□ 0.081e-7■■■■■ 43.3
XRN2Q9H0D6 CCDC12-211ENST00000604367 2412 nt15.48■□□□□ 0.071e-7■■■■■ 43.3
XRN2Q9H0D6 TBCD-214ENST00000574801 586 ntTSL 415.47■□□□□ 0.071e-7■■■■■ 43.3
XRN2Q9H0D6 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.3■□□□□ 0.041e-7■■■■■ 43.3
XRN2Q9H0D6 TLE3-209ENST00000557919 4294 ntTSL 515.04■□□□□ -01e-7■■■■■ 43.3
XRN2Q9H0D6 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -01e-7■■■■■ 43.3
XRN2Q9H0D6 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.011e-7■■■■■ 43.3
XRN2Q9H0D6 ZFP2-204ENST00000520805 532 ntTSL 414.94□□□□□ -0.021e-7■■■■■ 43.3
XRN2Q9H0D6 VPS37C-203ENST00000536000 915 ntTSL 214.93□□□□□ -0.021e-7■■■■■ 43.3
XRN2Q9H0D6 KCTD7-203ENST00000449064 538 ntTSL 414.4□□□□□ -0.11e-7■■■■■ 43.3
XRN2Q9H0D6 ZNF395-209ENST00000522795 501 ntTSL 314.38□□□□□ -0.111e-7■■■■■ 43.3
XRN2Q9H0D6 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.142e-14■■■■■ 43.3
XRN2Q9H0D6 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.161e-7■■■■■ 43.3
XRN2Q9H0D6 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.21e-7■■■■■ 43.3
XRN2Q9H0D6 PRDM11-204ENST00000530656 1536 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.21e-7■■■■■ 43.3
XRN2Q9H0D6 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.21e-7■■■■■ 43.3
XRN2Q9H0D6 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.21e-7■■■■■ 43.3
XRN2Q9H0D6 ZFP2-203ENST00000520660 598 ntTSL 413.69□□□□□ -0.221e-7■■■■■ 43.3
XRN2Q9H0D6 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC13.69□□□□□ -0.221e-7■■■■■ 43.3
XRN2Q9H0D6 TLE3-221ENST00000560525 3647 ntTSL 513.66□□□□□ -0.221e-7■■■■■ 43.3
XRN2Q9H0D6 PRDM15-204ENST00000433067 6124 ntTSL 513.64□□□□□ -0.231e-7■■■■■ 43.3
XRN2Q9H0D6 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.61□□□□□ -0.231e-7■■■■■ 43.3
XRN2Q9H0D6 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.54□□□□□ -0.241e-7■■■■■ 43.3
XRN2Q9H0D6 CCDC149-201ENST00000324309 5604 ntTSL 213.49□□□□□ -0.252e-14■■■■■ 43.3
XRN2Q9H0D6 TLE3-224ENST00000560996 495 ntTSL 513.34□□□□□ -0.271e-7■■■■■ 43.3
XRN2Q9H0D6 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.281e-7■■■■■ 43.3
XRN2Q9H0D6 TBCD-206ENST00000571712 850 ntTSL 513.24□□□□□ -0.291e-7■■■■■ 43.3
XRN2Q9H0D6 DNAH17-203ENST00000586052 6551 ntTSL 513.13□□□□□ -0.311e-7■■■■■ 43.3
XRN2Q9H0D6 DUXAP8-202ENST00000413768 2102 ntTSL 2 BASIC12.91□□□□□ -0.341e-7■■■■■ 43.3
XRN2Q9H0D6 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC12.88□□□□□ -0.351e-7■■■■■ 43.3
XRN2Q9H0D6 TLE3-213ENST00000558379 2304 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.351e-7■■■■■ 43.3
XRN2Q9H0D6 TLE3-225ENST00000561453 3719 ntTSL 512.81□□□□□ -0.361e-7■■■■■ 43.3
XRN2Q9H0D6 FBXO16-210ENST00000521548 2983 ntTSL 212.78□□□□□ -0.361e-7■■■■■ 43.3
XRN2Q9H0D6 KCTD7-209ENST00000640385 4118 ntTSL 5 BASIC12.54□□□□□ -0.41e-7■■■■■ 43.3
XRN2Q9H0D6 TLE3-208ENST00000557907 2295 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.421e-7■■■■■ 43.3
XRN2Q9H0D6 TBCD-219ENST00000576160 942 ntTSL 511.87□□□□□ -0.511e-7■■■■■ 43.3
XRN2Q9H0D6 RPL18-203ENST00000547892 3844 nt11.84□□□□□ -0.518e-8■■■■■ 43.3
XRN2Q9H0D6 AC073046.1-201ENST00000441217 390 ntTSL 3 BASIC11.69□□□□□ -0.544e-11■■■■■ 43.3
XRN2Q9H0D6 KCTD7-211ENST00000640851 3745 ntTSL 5 BASIC11.4□□□□□ -0.581e-7■■■■■ 43.3
XRN2Q9H0D6 DNAH17-208ENST00000591369 5220 ntTSL 511.39□□□□□ -0.591e-7■■■■■ 43.3
XRN2Q9H0D6 KCTD7-207ENST00000639879 5098 ntTSL 4 BASIC11.37□□□□□ -0.591e-7■■■■■ 43.3
XRN2Q9H0D6 PTK2-234ENST00000521791 556 ntTSL 411.34□□□□□ -0.591e-10■■■■■ 43.3
XRN2Q9H0D6 CCDC149-202ENST00000389609 2127 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.612e-14■■■■■ 43.3
XRN2Q9H0D6 PRDM15-208ENST00000449395 6662 ntTSL 1 (best)11□□□□□ -0.651e-7■■■■■ 43.3
XRN2Q9H0D6 AC107871.1-204ENST00000638026 2895 ntTSL 1 (best)10.8□□□□□ -0.681e-7■■■■■ 43.3
XRN2Q9H0D6 CALML4-204ENST00000448060 2520 ntTSL 2 BASIC10.8□□□□□ -0.681e-7■■■■■ 43.3
XRN2Q9H0D6 KCTD7-208ENST00000640234 1704 ntTSL 510.58□□□□□ -0.721e-7■■■■■ 43.3
XRN2Q9H0D6 PRDM15-202ENST00000398548 6654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.731e-7■■■■■ 43.3
XRN2Q9H0D6 PRDM15-205ENST00000441787 6542 ntTSL 1 (best)10.2□□□□□ -0.781e-7■■■■■ 43.3
XRN2Q9H0D6 PRDM15-203ENST00000422911 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.81e-7■■■■■ 43.3
XRN2Q9H0D6 MTHFD2L-212ENST00000484725 468 ntTSL 29.42□□□□□ -0.94e-8■■■■■ 43.3
XRN2Q9H0D6 KCTD7-204ENST00000638524 3747 ntTSL 59.4□□□□□ -0.91e-7■■■■■ 43.3
XRN2Q9H0D6 CALML4-208ENST00000540479 4603 ntTSL 1 (best) BASIC9.09□□□□□ -0.951e-7■■■■■ 43.3
XRN2Q9H0D6 KCTD7-205ENST00000638540 4471 ntTSL 58.98□□□□□ -0.971e-7■■■■■ 43.3
XRN2Q9H0D6 ARHGEF2-209ENST00000470874 372 ntTSL 38.77□□□□□ -1.011e-7■■■■■ 43.3
XRN2Q9H0D6 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC8.7□□□□□ -1.021e-7■■■■■ 43.3
XRN2Q9H0D6 OLA1-206ENST00000428402 1270 ntTSL 1 (best) BASIC8.44□□□□□ -1.061e-7■■■■■ 43.3
XRN2Q9H0D6 CCDC149-204ENST00000504487 3869 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.072e-14■■■■■ 43.3
XRN2Q9H0D6 MTHFD2L-206ENST00000429519 1798 ntTSL 58.31□□□□□ -1.084e-8■■■■■ 43.3
XRN2Q9H0D6 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC8.24□□□□□ -1.091e-7■■■■■ 43.3
XRN2Q9H0D6 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.241e-7■■■■■ 43.3
XRN2Q9H0D6 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC7.09□□□□□ -1.284e-8■■■■■ 43.3
XRN2Q9H0D6 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.04□□□□□ -1.281e-7■■■■■ 43.3
XRN2Q9H0D6 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.364e-8■■■■■ 43.3
XRN2Q9H0D6 OLA1-207ENST00000429575 485 ntTSL 36.53□□□□□ -1.361e-7■■■■■ 43.3
XRN2Q9H0D6 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.421e-7■■■■■ 43.3
XRN2Q9H0D6 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.451e-7■■■■■ 43.3
XRN2Q9H0D6 MTHFD2L-214ENST00000490698 689 ntTSL 25.59□□□□□ -1.514e-8■■■■■ 43.3
XRN2Q9H0D6 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.541e-7■■■■■ 43.3
XRN2Q9H0D6 CALML4-207ENST00000478113 3651 ntTSL 1 (best)5.34□□□□□ -1.551e-7■■■■■ 43.3
XRN2Q9H0D6 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.571e-7■■■■■ 43.3
XRN2Q9H0D6 MTHFD2L-205ENST00000429335 786 ntTSL 1 (best)4.97□□□□□ -1.614e-8■■■■■ 43.3
XRN2Q9H0D6 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.641e-7■■■■■ 43.3
XRN2Q9H0D6 MTHFD2L-211ENST00000475291 954 ntTSL 24.68□□□□□ -1.664e-8■■■■■ 43.3
XRN2Q9H0D6 RNU6-32P-201ENST00000383948 107 ntBASIC0.2□□□□□ -2.381e-7■■■■■ 43.3
XRN2Q9H0D6 CUX1-220ENST00000607092 559 ntTSL 37.77□□□□□ -1.175e-8■■■■■ 43.2
XRN2Q9H0D6 PFKL-207ENST00000474114 6007 ntTSL 1 (best)18.05■□□□□ 0.488e-8■■■■■ 42.9
XRN2Q9H0D6 PFKL-211ENST00000498841 3122 ntTSL 1 (best)16.6■□□□□ 0.258e-8■■■■■ 42.9
XRN2Q9H0D6 RAP1GAP-210ENST00000482984 331 ntTSL 56.22□□□□□ -1.412e-6■■■■■ 42.9
XRN2Q9H0D6 PRKAR1B-206ENST00000417852 651 ntTSL 222.13■■□□□ 1.133e-6■■■■■ 42.9
XRN2Q9H0D6 ADARB1-207ENST00000460734 2523 ntTSL 1 (best)25.41■■□□□ 1.662e-6■■■■■ 42.8
XRN2Q9H0D6 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.125e-7■■■■■ 42.8
XRN2Q9H0D6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.97■■□□□ 1.911e-6■■■■■ 42.8
XRN2Q9H0D6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC25.58■■□□□ 1.691e-6■■■■■ 42.8
XRN2Q9H0D6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC24.16■■□□□ 1.461e-6■■■■■ 42.8
XRN2Q9H0D6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC23.38■■□□□ 1.331e-6■■■■■ 42.8
XRN2Q9H0D6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.281e-6■■■■■ 42.8
XRN2Q9H0D6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.221e-6■■■■■ 42.8
XRN2Q9H0D6 C9orf3-207ENST00000445181 873 ntTSL 328.13■■■□□ 2.093e-15■■■■■ 42.5
XRN2Q9H0D6 CHMP6-202ENST00000571457 552 ntTSL 314.21□□□□□ -0.131e-6■■■■■ 42.5
XRN2Q9H0D6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.57■■□□□ 1.049e-9■■■■■ 42.4
XRN2Q9H0D6 STRBP-203ENST00000407982 2751 ntTSL 1 (best)19.68■□□□□ 0.749e-9■■■■■ 42.4
XRN2Q9H0D6 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.529e-9■■■■■ 42.4
XRN2Q9H0D6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC29.78■■■□□ 2.362e-10■■■■■ 42.3
Retrieved 100 of 21,068 protein–RNA pairs in 270 ms