RNA–Protein interactions for RNA: ENST00000429519.5

MTHFD2L-206, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like, humanhuman

TSL 5

Gene MTHFD2L, Length 1,798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2L-206ENST00000429519 AEBP2Q6ZN18 517 aaPredicted RBP17.48■□□□□ 0.39
MTHFD2L-206ENST00000429519 NISCHQ9Y2I1 1504 aa17.46■□□□□ 0.39
MTHFD2L-206ENST00000429519 CHIC1Q5VXU3 224 aa16.49■□□□□ 0.23
MTHFD2L-206ENST00000429519 SENP3Q9H4L4 574 aaPredicted RBP15.22■□□□□ 0.03
MTHFD2L-206ENST00000429519 POTEDQ86YR6 584 aa15.13■□□□□ 0.01
MTHFD2L-206ENST00000429519 CCDC180Q9P1Z9 1646 aa14.97□□□□□ -0.01
MTHFD2L-206ENST00000429519 PHF23Q9BUL5 403 aaPredicted RBP14.82□□□□□ -0.04
MTHFD2L-206ENST00000429519 ZCCHC6Q5VYS8 1495 aaKnown RBP14.78□□□□□ -0.04
MTHFD2L-206ENST00000429519 SHROOM4Q9ULL8 1493 aa14.54□□□□□ -0.08
MTHFD2L-206ENST00000429519 DCAF1Q9Y4B6 1507 aa14.49□□□□□ -0.09
MTHFD2L-206ENST00000429519 SUPT5HO00267 1087 aaKnown RBP14.29□□□□□ -0.12
MTHFD2L-206ENST00000429519 FOXD1Q16676 465 aa14.22□□□□□ -0.13
MTHFD2L-206ENST00000429519 DCAF8L2P0C7V8 631 aa14.11□□□□□ -0.15
MTHFD2L-206ENST00000429519 MYO15BQ96JP2 1530 aa14.11□□□□□ -0.15
MTHFD2L-206ENST00000429519 ABCC9O60706 1549 aa13.94□□□□□ -0.18
MTHFD2L-206ENST00000429519 MSH5O43196 834 aa13.82□□□□□ -0.2
MTHFD2L-206ENST00000429519 NACADO15069 1562 aa13.8□□□□□ -0.2
MTHFD2L-206ENST00000429519 SCRIBQ14160 1630 aa13.77□□□□□ -0.2
MTHFD2L-206ENST00000429519 RSF1Q96T23 1441 aaPredicted RBP13.75□□□□□ -0.21
MTHFD2L-206ENST00000429519 RB1CC1Q8TDY2 1594 aa13.68□□□□□ -0.22
MTHFD2L-206ENST00000429519 HRCP23327 699 aa13.63□□□□□ -0.23
MTHFD2L-206ENST00000429519 LOC105371045A0A1W2PR82 267 aa13.5□□□□□ -0.25
MTHFD2L-206ENST00000429519 CECR2Q9BXF3 1484 aa13.49□□□□□ -0.25
MTHFD2L-206ENST00000429519 MROH2BQ7Z745 1585 aa13.49□□□□□ -0.25
MTHFD2L-206ENST00000429519 PCGF6Q9BYE7 350 aa13.48□□□□□ -0.25
MTHFD2L-206ENST00000429519 BAZ1AQ9NRL2 1556 aaPredicted RBP13.43□□□□□ -0.26
MTHFD2L-206ENST00000429519 TRIM41Q8WV44 630 aa13.43□□□□□ -0.26
MTHFD2L-206ENST00000429519 WIZO95785 1651 aa13.41□□□□□ -0.26
MTHFD2L-206ENST00000429519 TRIM26Q12899 539 aaPredicted RBP13.4□□□□□ -0.26
MTHFD2L-206ENST00000429519 EHMT2Q96KQ7 1210 aa13.37□□□□□ -0.27
MTHFD2L-206ENST00000429519 EIF4G1Q04637 1599 aaKnown RBP13.35□□□□□ -0.27
MTHFD2L-206ENST00000429519 TOP2AP11388 1531 aaKnown RBP13.3□□□□□ -0.28
MTHFD2L-206ENST00000429519 UNC13AQ9UPW8 1703 aa13.3□□□□□ -0.28
MTHFD2L-206ENST00000429519 SMARCA4P51532 1647 aa13.29□□□□□ -0.28
MTHFD2L-206ENST00000429519 PLPPR3Q6T4P5 718 aa13.24□□□□□ -0.29
MTHFD2L-206ENST00000429519 ZEB1P37275 1124 aaPredicted RBP13.2□□□□□ -0.3
MTHFD2L-206ENST00000429519 SMARCA2P51531 1590 aa13.19□□□□□ -0.3
MTHFD2L-206ENST00000429519 CCDC88BA6NC98 1476 aa13.17□□□□□ -0.3
MTHFD2L-206ENST00000429519 FAM9AQ8IZU1 332 aaPredicted RBP13.15□□□□□ -0.31
MTHFD2L-206ENST00000429519 PEG3Q9GZU2 1588 aa13.14□□□□□ -0.31
MTHFD2L-206ENST00000429519 PPARGC1BQ86YN6 1023 aaKnown RBP13.13□□□□□ -0.31
MTHFD2L-206ENST00000429519 BICRAQ9NZM4 1560 aa13.13□□□□□ -0.31
MTHFD2L-206ENST00000429519 PIAS4Q8N2W9 510 aaPredicted RBP13.09□□□□□ -0.31
MTHFD2L-206ENST00000429519 EEA1Q15075 1411 aa13.09□□□□□ -0.31
MTHFD2L-206ENST00000429519 ABCC8Q09428 1581 aa13.04□□□□□ -0.32
MTHFD2L-206ENST00000429519 WRNQ14191 1432 aaPredicted RBP eCLIP13.04□□□□□ -0.32
MTHFD2L-206ENST00000429519 TNIKQ9UKE5 1360 aa12.99□□□□□ -0.33
MTHFD2L-206ENST00000429519 SOGA1O94964 1423 aa12.92□□□□□ -0.34
MTHFD2L-206ENST00000429519 CSRNP3Q8WYN3 585 aa12.92□□□□□ -0.34
MTHFD2L-206ENST00000429519 ATAD2BQ9ULI0 1458 aa12.92□□□□□ -0.34
MTHFD2L-206ENST00000429519 CEP162Q5TB80 1403 aa12.91□□□□□ -0.34
MTHFD2L-206ENST00000429519 GOLGA3Q08378 1498 aa12.89□□□□□ -0.35
MTHFD2L-206ENST00000429519 PABPN1Q86U42 306 aaKnown RBP eCLIP12.89□□□□□ -0.35
MTHFD2L-206ENST00000429519 KIF21BO75037 1637 aa12.87□□□□□ -0.35
MTHFD2L-206ENST00000429519 KCNA4P22459 653 aa12.87□□□□□ -0.35
MTHFD2L-206ENST00000429519 BAZ1BQ9UIG0 1483 aaKnown RBP12.85□□□□□ -0.35
MTHFD2L-206ENST00000429519 RUSC2Q8N2Y8 1516 aa12.85□□□□□ -0.35
MTHFD2L-206ENST00000429519 SYNJ1O43426 1573 aa12.84□□□□□ -0.35
MTHFD2L-206ENST00000429519 CEP164Q9UPV0 1460 aa12.83□□□□□ -0.36
MTHFD2L-206ENST00000429519 TOP2BQ02880 1626 aa12.77□□□□□ -0.36
MTHFD2L-206ENST00000429519 HMGXB3Q12766 1538 aa12.76□□□□□ -0.37
MTHFD2L-206ENST00000429519 BIVM-ERCC5R4GMW8 1640 aa12.76□□□□□ -0.37
MTHFD2L-206ENST00000429519 UBTFP17480 764 aaKnown RBP12.75□□□□□ -0.37
MTHFD2L-206ENST00000429519 SLC24A1O60721 1099 aa12.74□□□□□ -0.37
MTHFD2L-206ENST00000429519 NCAPD3P42695 1498 aa12.74□□□□□ -0.37
MTHFD2L-206ENST00000429519 CCER1Q8TC90 406 aaPredicted RBP12.71□□□□□ -0.38
MTHFD2L-206ENST00000429519 CLIP1P30622 1438 aa12.69□□□□□ -0.38
MTHFD2L-206ENST00000429519 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.69□□□□□ -0.38
MTHFD2L-206ENST00000429519 VPS8Q8N3P4 1428 aa12.68□□□□□ -0.38
MTHFD2L-206ENST00000429519 ERICH3Q5RHP9 1530 aa12.68□□□□□ -0.38
MTHFD2L-206ENST00000429519 RAPGEF2Q9Y4G8 1499 aa12.64□□□□□ -0.39
MTHFD2L-206ENST00000429519 PRXQ9BXM0 1461 aa12.63□□□□□ -0.39
MTHFD2L-206ENST00000429519 CFTRP13569 1480 aa12.6□□□□□ -0.39
MTHFD2L-206ENST00000429519 PRDM2Q13029 1718 aa12.6□□□□□ -0.39
MTHFD2L-206ENST00000429519 ADRA2BP18089 450 aa12.58□□□□□ -0.39
MTHFD2L-206ENST00000429519 CUX1P39880 1505 aa12.58□□□□□ -0.4
MTHFD2L-206ENST00000429519 KIF27Q86VH2 1401 aa12.54□□□□□ -0.4
MTHFD2L-206ENST00000429519 DNAJC5BQ9UF47 199 aa12.53□□□□□ -0.4
MTHFD2L-206ENST00000429519 APLP2Q06481 763 aa12.52□□□□□ -0.41
MTHFD2L-206ENST00000429519 ARAP1Q96P48 1450 aa12.51□□□□□ -0.41
MTHFD2L-206ENST00000429519 DIEXFQ68CQ4 756 aaKnown RBP12.5□□□□□ -0.41
MTHFD2L-206ENST00000429519 TTBK1Q5TCY1 1321 aaPredicted RBP12.49□□□□□ -0.41
MTHFD2L-206ENST00000429519 ZNF316A6NFI3 1004 aaPredicted RBP12.48□□□□□ -0.41
MTHFD2L-206ENST00000429519 CACNB1Q02641 598 aaPredicted RBP12.47□□□□□ -0.41
MTHFD2L-206ENST00000429519 CLSPNQ9HAW4 1339 aa12.47□□□□□ -0.41
MTHFD2L-206ENST00000429519 SCAF1Q9H7N4 1312 aaKnown RBP12.46□□□□□ -0.42
MTHFD2L-206ENST00000429519 PPP6R1Q9UPN7 881 aa12.46□□□□□ -0.42
MTHFD2L-206ENST00000429519 ACIN1Q9UKV3 1341 aaKnown RBP12.43□□□□□ -0.42
MTHFD2L-206ENST00000429519 CADPSQ9ULU8 1353 aa12.43□□□□□ -0.42
MTHFD2L-206ENST00000429519 MAP3K1Q13233 1512 aa12.42□□□□□ -0.42
MTHFD2L-206ENST00000429519 RRBP1Q9P2E9 1410 aaKnown RBP12.42□□□□□ -0.42
MTHFD2L-206ENST00000429519 HNRNPUL2Q1KMD3 747 aaKnown RBP12.41□□□□□ -0.42
MTHFD2L-206ENST00000429519 PELP1Q8IZL8 1130 aaKnown RBP12.41□□□□□ -0.42
MTHFD2L-206ENST00000429519 CUX2O14529 1486 aa12.4□□□□□ -0.42
MTHFD2L-206ENST00000429519 ARHGAP35Q9NRY4 1499 aa12.4□□□□□ -0.42
MTHFD2L-206ENST00000429519 CENPBP07199 599 aaPredicted RBP12.38□□□□□ -0.43
MTHFD2L-206ENST00000429519 IGF1RP08069 1367 aa12.38□□□□□ -0.43
MTHFD2L-206ENST00000429519 SLC4A1APQ9BWU0 796 aaKnown RBP12.35□□□□□ -0.43
MTHFD2L-206ENST00000429519 FGD5Q6ZNL6 1462 aa12.34□□□□□ -0.43
MTHFD2L-206ENST00000429519 NEUROD1Q13562 356 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms