RNA–Protein interactions for RNA: ENST00000449395.5

PRDM15-208, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 6,662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-208ENST00000449395 DCAF8L2P0C7V8 631 aa19.52■□□□□ 0.72
PRDM15-208ENST00000449395 FAM9AQ8IZU1 332 aaPredicted RBP17.2■□□□□ 0.34
PRDM15-208ENST00000449395 SUPT5HO00267 1087 aaKnown RBP17.19■□□□□ 0.34
PRDM15-208ENST00000449395 NISCHQ9Y2I1 1504 aa17.14■□□□□ 0.33
PRDM15-208ENST00000449395 EHMT2Q96KQ7 1210 aa16.98■□□□□ 0.31
PRDM15-208ENST00000449395 SHROOM4Q9ULL8 1493 aa16.89■□□□□ 0.29
PRDM15-208ENST00000449395 TTBK1Q5TCY1 1321 aaPredicted RBP16.74■□□□□ 0.27
PRDM15-208ENST00000449395 MYT1LQ9UL68 1186 aa16.7■□□□□ 0.26
PRDM15-208ENST00000449395 ATP1B4Q9UN42 357 aaPredicted RBP16.64■□□□□ 0.25
PRDM15-208ENST00000449395 RANGAP1P46060 587 aaPredicted RBP16.6■□□□□ 0.25
PRDM15-208ENST00000449395 PELP1Q8IZL8 1130 aaKnown RBP16.49■□□□□ 0.23
PRDM15-208ENST00000449395 CHIC1Q5VXU3 224 aa16.44■□□□□ 0.22
PRDM15-208ENST00000449395 APLP2Q06481 763 aa16.42■□□□□ 0.22
PRDM15-208ENST00000449395 ABCC9O60706 1549 aa16.38■□□□□ 0.21
PRDM15-208ENST00000449395 PABPN1Q86U42 306 aaKnown RBP eCLIP16.36■□□□□ 0.21
PRDM15-208ENST00000449395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.31■□□□□ 0.2
PRDM15-208ENST00000449395 HNRNPUL2Q1KMD3 747 aaKnown RBP16.31■□□□□ 0.2
PRDM15-208ENST00000449395 FBLN2P98095 1184 aa16.21■□□□□ 0.18
PRDM15-208ENST00000449395 PLPPR3Q6T4P5 718 aa16.16■□□□□ 0.18
PRDM15-208ENST00000449395 PCGF6Q9BYE7 350 aa16.13■□□□□ 0.17
PRDM15-208ENST00000449395 TRIM41Q8WV44 630 aa15.92■□□□□ 0.14
PRDM15-208ENST00000449395 ZEB1P37275 1124 aaPredicted RBP15.89■□□□□ 0.13
PRDM15-208ENST00000449395 CENPBP07199 599 aaPredicted RBP15.89■□□□□ 0.13
PRDM15-208ENST00000449395 CCER1Q8TC90 406 aaPredicted RBP15.88■□□□□ 0.13
PRDM15-208ENST00000449395 TRHP20396 242 aaPredicted RBP15.84■□□□□ 0.13
PRDM15-208ENST00000449395 AEBP2Q6ZN18 517 aaPredicted RBP15.83■□□□□ 0.13
PRDM15-208ENST00000449395 ERICH6Q7L0X2 663 aa15.83■□□□□ 0.12
PRDM15-208ENST00000449395 UBTFP17480 764 aaKnown RBP15.77■□□□□ 0.11
PRDM15-208ENST00000449395 BCANQ96GW7 911 aa15.76■□□□□ 0.11
PRDM15-208ENST00000449395 ESF1Q9H501 851 aaKnown RBP15.68■□□□□ 0.1
PRDM15-208ENST00000449395 NPM1P06748 294 aaKnown RBP eCLIP15.66■□□□□ 0.1
PRDM15-208ENST00000449395 SLC4A1APQ9BWU0 796 aaKnown RBP15.6■□□□□ 0.09
PRDM15-208ENST00000449395 NEFLP07196 543 aa15.59■□□□□ 0.09
PRDM15-208ENST00000449395 YTHDC1Q96MU7 727 aaKnown RBP15.57■□□□□ 0.08
PRDM15-208ENST00000449395 PPARGC1BQ86YN6 1023 aaKnown RBP15.53■□□□□ 0.08
PRDM15-208ENST00000449395 SENP3Q9H4L4 574 aaPredicted RBP15.43■□□□□ 0.06
PRDM15-208ENST00000449395 TRIM26Q12899 539 aaPredicted RBP15.42■□□□□ 0.06
PRDM15-208ENST00000449395 ARID3CA6NKF2 412 aa15.41■□□□□ 0.06
PRDM15-208ENST00000449395 SCAF1Q9H7N4 1312 aaKnown RBP15.35■□□□□ 0.05
PRDM15-208ENST00000449395 ITGAEP38570 1179 aa15.32■□□□□ 0.04
PRDM15-208ENST00000449395 ARID4BQ4LE39 1312 aaPredicted RBP15.31■□□□□ 0.04
PRDM15-208ENST00000449395 POLR3GLQ9BT43 218 aa15.31■□□□□ 0.04
PRDM15-208ENST00000449395 STAG3Q9UJ98 1225 aa15.28■□□□□ 0.04
PRDM15-208ENST00000449395 MYT1Q01538 1121 aa15.28■□□□□ 0.04
PRDM15-208ENST00000449395 ERCC6Q03468 1493 aa15.26■□□□□ 0.03
PRDM15-208ENST00000449395 A0A0G2JS52 829 aa15.26■□□□□ 0.03
PRDM15-208ENST00000449395 HRCP23327 699 aa15.24■□□□□ 0.03
PRDM15-208ENST00000449395 SLC24A1O60721 1099 aa15.23■□□□□ 0.03
PRDM15-208ENST00000449395 LOC105371045A0A1W2PR82 267 aa15.22■□□□□ 0.03
PRDM15-208ENST00000449395 DAXXQ9UER7 740 aaPredicted RBP15.16■□□□□ 0.02
PRDM15-208ENST00000449395 PLEKHG5O94827 1062 aa15.16■□□□□ 0.02
PRDM15-208ENST00000449395 CHMP7Q8WUX9 453 aaPredicted RBP15.13■□□□□ 0.01
PRDM15-208ENST00000449395 CNGB1Q14028 1251 aaPredicted RBP15.12■□□□□ 0.01
PRDM15-208ENST00000449395 C14orf37Q86TY3 774 aa15.09■□□□□ 0.01
PRDM15-208ENST00000449395 ZNF777Q9ULD5 760 aaPredicted RBP15.07■□□□□ 0
PRDM15-208ENST00000449395 CHGAP10645 457 aaKnown RBP15.04■□□□□ -0
PRDM15-208ENST00000449395 P3H3Q8IVL6 736 aa15.02□□□□□ -0.01
PRDM15-208ENST00000449395 HAP1P54257 671 aaPredicted RBP15□□□□□ -0.01
PRDM15-208ENST00000449395 KCNH8Q96L42 1107 aa14.93□□□□□ -0.02
PRDM15-208ENST00000449395 DIEXFQ68CQ4 756 aaKnown RBP14.93□□□□□ -0.02
PRDM15-208ENST00000449395 TRIM52Q96A61 297 aa14.92□□□□□ -0.02
PRDM15-208ENST00000449395 FAM50AQ14320 339 aaKnown RBP14.9□□□□□ -0.02
PRDM15-208ENST00000449395 ZBTB7CA1YPR0 619 aa14.89□□□□□ -0.03
PRDM15-208ENST00000449395 PHF23Q9BUL5 403 aaPredicted RBP14.88□□□□□ -0.03
PRDM15-208ENST00000449395 SCRIBQ14160 1630 aa14.85□□□□□ -0.03
PRDM15-208ENST00000449395 CLSPNQ9HAW4 1339 aa14.83□□□□□ -0.03
PRDM15-208ENST00000449395 MLECQ14165 292 aa14.82□□□□□ -0.04
PRDM15-208ENST00000449395 ZNF316A6NFI3 1004 aaPredicted RBP14.81□□□□□ -0.04
PRDM15-208ENST00000449395 NEUROD1Q13562 356 aa14.8□□□□□ -0.04
PRDM15-208ENST00000449395 ZNF326Q5BKZ1 582 aaKnown RBP14.79□□□□□ -0.04
PRDM15-208ENST00000449395 RTL5Q5HYW3 569 aaPredicted RBP14.78□□□□□ -0.04
PRDM15-208ENST00000449395 PPP1R15AO75807 674 aaPredicted RBP14.75□□□□□ -0.05
PRDM15-208ENST00000449395 CDK11AQ9UQ88 783 aaPredicted RBP14.73□□□□□ -0.05
PRDM15-208ENST00000449395 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.7□□□□□ -0.06
PRDM15-208ENST00000449395 CYB5RLQ6IPT4 315 aa14.68□□□□□ -0.06
PRDM15-208ENST00000449395 ANP32CO43423 234 aa14.67□□□□□ -0.06
PRDM15-208ENST00000449395 RB1CC1Q8TDY2 1594 aa14.66□□□□□ -0.06
PRDM15-208ENST00000449395 LMOD2Q6P5Q4 547 aa14.66□□□□□ -0.06
PRDM15-208ENST00000449395 GTF3C3Q9Y5Q9 886 aa14.61□□□□□ -0.07
PRDM15-208ENST00000449395 DCAF8L1A6NGE4 600 aa14.6□□□□□ -0.07
PRDM15-208ENST00000449395 BCL11AQ9H165 835 aa14.59□□□□□ -0.07
PRDM15-208ENST00000449395 NPM2Q86SE8 214 aaKnown RBP14.57□□□□□ -0.08
PRDM15-208ENST00000449395 ZBTB47Q9UFB7 747 aaPredicted RBP14.55□□□□□ -0.08
PRDM15-208ENST00000449395 CCDC9Q9Y3X0 531 aaKnown RBP14.55□□□□□ -0.08
PRDM15-208ENST00000449395 MEX3CQ5U5Q3 659 aaKnown RBP14.53□□□□□ -0.08
PRDM15-208ENST00000449395 NEFMP07197 916 aa14.51□□□□□ -0.09
PRDM15-208ENST00000449395 NPHP1O15259 732 aa14.51□□□□□ -0.09
PRDM15-208ENST00000449395 ARXQ96QS3 562 aa14.5□□□□□ -0.09
PRDM15-208ENST00000449395 CANXP27824 592 aaKnown RBP14.48□□□□□ -0.09
PRDM15-208ENST00000449395 OSCARQ8IYS5 282 aa14.45□□□□□ -0.1
PRDM15-208ENST00000449395 CSRNP3Q8WYN3 585 aa14.45□□□□□ -0.1
PRDM15-208ENST00000449395 CECR2Q9BXF3 1484 aa14.42□□□□□ -0.1
PRDM15-208ENST00000449395 ACIN1Q9UKV3 1341 aaKnown RBP14.37□□□□□ -0.11
PRDM15-208ENST00000449395 PLEKHD1A6NEE1 506 aa14.36□□□□□ -0.11
PRDM15-208ENST00000449395 TSPY4P0CV99 314 aa14.34□□□□□ -0.11
PRDM15-208ENST00000449395 TSPY10P0CW01 314 aa14.34□□□□□ -0.11
PRDM15-208ENST00000449395 ANP32AP39687 249 aaKnown RBP14.33□□□□□ -0.12
PRDM15-208ENST00000449395 KLHL34Q8N239 644 aa14.32□□□□□ -0.12
PRDM15-208ENST00000449395 TONSLQ96HA7 1378 aa14.27□□□□□ -0.13
PRDM15-208ENST00000449395 FOXD1Q16676 465 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms