Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.97■□□□□ 0.95
TIMD4Q96H15 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TIMD4Q96H15 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TIMD4Q96H15 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TIMD4Q96H15 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TIMD4Q96H15 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.96■□□□□ 0.95
TIMD4Q96H15 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.96■□□□□ 0.95
TIMD4Q96H15 AL359258.2-201ENST00000564063 1566 ntBASIC20.95■□□□□ 0.94
TIMD4Q96H15 ECEL1P2-201ENST00000461596 1295 ntBASIC20.95■□□□□ 0.94
TIMD4Q96H15 AC092296.2-201ENST00000589470 999 ntBASIC20.95■□□□□ 0.94
TIMD4Q96H15 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TIMD4Q96H15 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TIMD4Q96H15 AC018358.1-201ENST00000631079 1402 ntBASIC20.95■□□□□ 0.94
TIMD4Q96H15 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TIMD4Q96H15 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.94■□□□□ 0.94
TIMD4Q96H15 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TIMD4Q96H15 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.94■□□□□ 0.94
TIMD4Q96H15 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TIMD4Q96H15 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TIMD4Q96H15 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TIMD4Q96H15 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.93■□□□□ 0.94
TIMD4Q96H15 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TIMD4Q96H15 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TIMD4Q96H15 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TIMD4Q96H15 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.92■□□□□ 0.94
TIMD4Q96H15 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.92■□□□□ 0.94
TIMD4Q96H15 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TIMD4Q96H15 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.92■□□□□ 0.94
TIMD4Q96H15 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TIMD4Q96H15 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TIMD4Q96H15 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TIMD4Q96H15 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TIMD4Q96H15 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TIMD4Q96H15 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TIMD4Q96H15 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.89■□□□□ 0.93
TIMD4Q96H15 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TIMD4Q96H15 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.88■□□□□ 0.93
TIMD4Q96H15 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
TIMD4Q96H15 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.88■□□□□ 0.93
TIMD4Q96H15 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TIMD4Q96H15 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TIMD4Q96H15 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TIMD4Q96H15 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.86■□□□□ 0.93
TIMD4Q96H15 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TIMD4Q96H15 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.86■□□□□ 0.93
TIMD4Q96H15 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TIMD4Q96H15 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TIMD4Q96H15 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.86■□□□□ 0.93
TIMD4Q96H15 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.86■□□□□ 0.93
TIMD4Q96H15 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TIMD4Q96H15 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TIMD4Q96H15 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TIMD4Q96H15 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TIMD4Q96H15 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.86■□□□□ 0.93
TIMD4Q96H15 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TIMD4Q96H15 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TIMD4Q96H15 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TIMD4Q96H15 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TIMD4Q96H15 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TIMD4Q96H15 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TIMD4Q96H15 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TIMD4Q96H15 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.85■□□□□ 0.93
TIMD4Q96H15 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.84■□□□□ 0.93
TIMD4Q96H15 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TIMD4Q96H15 AL157400.5-201ENST00000507624 621 ntBASIC20.84■□□□□ 0.93
TIMD4Q96H15 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.84■□□□□ 0.93
TIMD4Q96H15 NTF6A-201ENST00000591175 560 ntBASIC20.84■□□□□ 0.93
TIMD4Q96H15 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TIMD4Q96H15 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.83■□□□□ 0.93
TIMD4Q96H15 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TIMD4Q96H15 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
TIMD4Q96H15 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TIMD4Q96H15 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.83■□□□□ 0.92
TIMD4Q96H15 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.83■□□□□ 0.92
TIMD4Q96H15 AC139426.1-201ENST00000568218 2529 ntBASIC20.82■□□□□ 0.92
TIMD4Q96H15 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TIMD4Q96H15 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TIMD4Q96H15 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.82■□□□□ 0.92
TIMD4Q96H15 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TIMD4Q96H15 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.82■□□□□ 0.92
TIMD4Q96H15 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TIMD4Q96H15 SMPD5-203ENST00000639008 1464 ntBASIC20.81■□□□□ 0.92
TIMD4Q96H15 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
TIMD4Q96H15 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TIMD4Q96H15 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TIMD4Q96H15 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.81■□□□□ 0.92
TIMD4Q96H15 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.81■□□□□ 0.92
TIMD4Q96H15 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.81■□□□□ 0.92
TIMD4Q96H15 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TIMD4Q96H15 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TIMD4Q96H15 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TIMD4Q96H15 DRD5P2-201ENST00000421395 2012 ntBASIC20.8■□□□□ 0.92
TIMD4Q96H15 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TIMD4Q96H15 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TIMD4Q96H15 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TIMD4Q96H15 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.8■□□□□ 0.92
TIMD4Q96H15 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.79■□□□□ 0.92
TIMD4Q96H15 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TIMD4Q96H15 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.78■□□□□ 0.92
TIMD4Q96H15 AC007029.1-201ENST00000604183 313 ntBASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms