Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.57■□□□□ 0.72
NPIPB3Q92617 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
NPIPB3Q92617 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPIPB3Q92617 AC087741.3-201ENST00000624270 1347 ntBASIC19.55■□□□□ 0.72
NPIPB3Q92617 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NPIPB3Q92617 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NPIPB3Q92617 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NPIPB3Q92617 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.54■□□□□ 0.72
NPIPB3Q92617 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.54■□□□□ 0.72
NPIPB3Q92617 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NPIPB3Q92617 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.53■□□□□ 0.72
NPIPB3Q92617 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
NPIPB3Q92617 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.53■□□□□ 0.72
NPIPB3Q92617 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
NPIPB3Q92617 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
NPIPB3Q92617 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPIPB3Q92617 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NPIPB3Q92617 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPIPB3Q92617 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPIPB3Q92617 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.52■□□□□ 0.72
NPIPB3Q92617 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.52■□□□□ 0.72
NPIPB3Q92617 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NPIPB3Q92617 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
NPIPB3Q92617 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NPIPB3Q92617 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
NPIPB3Q92617 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.51■□□□□ 0.71
NPIPB3Q92617 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPIPB3Q92617 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.51■□□□□ 0.71
NPIPB3Q92617 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.51■□□□□ 0.71
NPIPB3Q92617 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPIPB3Q92617 AC110285.7-201ENST00000624417 1536 ntBASIC19.51■□□□□ 0.71
NPIPB3Q92617 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
NPIPB3Q92617 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.5■□□□□ 0.71
NPIPB3Q92617 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.5■□□□□ 0.71
NPIPB3Q92617 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.5■□□□□ 0.71
NPIPB3Q92617 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPB3Q92617 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPIPB3Q92617 AP004609.3-201ENST00000610705 1884 ntBASIC19.5■□□□□ 0.71
NPIPB3Q92617 AC145676.1-201ENST00000514988 2004 ntBASIC19.49■□□□□ 0.71
NPIPB3Q92617 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPIPB3Q92617 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.49■□□□□ 0.71
NPIPB3Q92617 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
NPIPB3Q92617 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPIPB3Q92617 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.48■□□□□ 0.71
NPIPB3Q92617 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPIPB3Q92617 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPIPB3Q92617 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
NPIPB3Q92617 AC044849.2-201ENST00000606596 710 ntBASIC19.48■□□□□ 0.71
NPIPB3Q92617 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPIPB3Q92617 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPIPB3Q92617 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NPIPB3Q92617 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPIPB3Q92617 AL162393.1-201ENST00000437852 946 ntBASIC19.47■□□□□ 0.71
NPIPB3Q92617 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.47■□□□□ 0.71
NPIPB3Q92617 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NPIPB3Q92617 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.47■□□□□ 0.71
NPIPB3Q92617 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
NPIPB3Q92617 AC135731.1-201ENST00000569415 2548 ntBASIC19.47■□□□□ 0.71
NPIPB3Q92617 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPIPB3Q92617 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.46■□□□□ 0.71
NPIPB3Q92617 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NPIPB3Q92617 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.46■□□□□ 0.71
NPIPB3Q92617 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.45■□□□□ 0.7
NPIPB3Q92617 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPB3Q92617 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPB3Q92617 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPB3Q92617 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.45■□□□□ 0.7
NPIPB3Q92617 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPB3Q92617 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.45■□□□□ 0.7
NPIPB3Q92617 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.45■□□□□ 0.7
NPIPB3Q92617 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPIPB3Q92617 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NPIPB3Q92617 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
NPIPB3Q92617 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.44■□□□□ 0.7
NPIPB3Q92617 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPIPB3Q92617 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NPIPB3Q92617 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPIPB3Q92617 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NPIPB3Q92617 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NPIPB3Q92617 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.43■□□□□ 0.7
NPIPB3Q92617 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPIPB3Q92617 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPIPB3Q92617 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NPIPB3Q92617 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPIPB3Q92617 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
NPIPB3Q92617 AC092803.2-201ENST00000564287 1899 ntBASIC19.41■□□□□ 0.7
NPIPB3Q92617 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NPIPB3Q92617 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPB3Q92617 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPB3Q92617 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPB3Q92617 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NPIPB3Q92617 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.39■□□□□ 0.69
NPIPB3Q92617 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPIPB3Q92617 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPIPB3Q92617 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NPIPB3Q92617 AC021231.2-201ENST00000594613 730 ntBASIC19.39■□□□□ 0.69
NPIPB3Q92617 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.39■□□□□ 0.69
NPIPB3Q92617 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.39■□□□□ 0.69
NPIPB3Q92617 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPIPB3Q92617 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms