Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
RAB40AQ8WXH6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAB40AQ8WXH6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.77■■□□□ 1.08
RAB40AQ8WXH6 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAB40AQ8WXH6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.76■■□□□ 1.07
RAB40AQ8WXH6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RAB40AQ8WXH6 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.76■■□□□ 1.07
RAB40AQ8WXH6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RAB40AQ8WXH6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RAB40AQ8WXH6 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RAB40AQ8WXH6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.75■■□□□ 1.07
RAB40AQ8WXH6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.75■■□□□ 1.07
RAB40AQ8WXH6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RAB40AQ8WXH6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RAB40AQ8WXH6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.74■■□□□ 1.07
RAB40AQ8WXH6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RAB40AQ8WXH6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB40AQ8WXH6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.73■■□□□ 1.07
RAB40AQ8WXH6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB40AQ8WXH6 AC020928.2-201ENST00000588717 2197 ntBASIC21.73■■□□□ 1.07
RAB40AQ8WXH6 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RAB40AQ8WXH6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RAB40AQ8WXH6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RAB40AQ8WXH6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.72■■□□□ 1.07
RAB40AQ8WXH6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
RAB40AQ8WXH6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RAB40AQ8WXH6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RAB40AQ8WXH6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
RAB40AQ8WXH6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.72■■□□□ 1.07
RAB40AQ8WXH6 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAB40AQ8WXH6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RAB40AQ8WXH6 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB40AQ8WXH6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RAB40AQ8WXH6 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RAB40AQ8WXH6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.7■■□□□ 1.06
RAB40AQ8WXH6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RAB40AQ8WXH6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.7■■□□□ 1.06
RAB40AQ8WXH6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB40AQ8WXH6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB40AQ8WXH6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.69■■□□□ 1.06
RAB40AQ8WXH6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB40AQ8WXH6 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB40AQ8WXH6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB40AQ8WXH6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB40AQ8WXH6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.69■■□□□ 1.06
RAB40AQ8WXH6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RAB40AQ8WXH6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
RAB40AQ8WXH6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RAB40AQ8WXH6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.68■■□□□ 1.06
RAB40AQ8WXH6 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RAB40AQ8WXH6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
RAB40AQ8WXH6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RAB40AQ8WXH6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.66■■□□□ 1.06
RAB40AQ8WXH6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RAB40AQ8WXH6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAB40AQ8WXH6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RAB40AQ8WXH6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RAB40AQ8WXH6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RAB40AQ8WXH6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB40AQ8WXH6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
RAB40AQ8WXH6 AC018358.1-201ENST00000631079 1402 ntBASIC21.65■■□□□ 1.06
RAB40AQ8WXH6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB40AQ8WXH6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
RAB40AQ8WXH6 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RAB40AQ8WXH6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.64■■□□□ 1.06
RAB40AQ8WXH6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
RAB40AQ8WXH6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAB40AQ8WXH6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RAB40AQ8WXH6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAB40AQ8WXH6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAB40AQ8WXH6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.63■■□□□ 1.05
RAB40AQ8WXH6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
RAB40AQ8WXH6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.63■■□□□ 1.05
RAB40AQ8WXH6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.63■■□□□ 1.05
RAB40AQ8WXH6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.63■■□□□ 1.05
RAB40AQ8WXH6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RAB40AQ8WXH6 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAB40AQ8WXH6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.62■■□□□ 1.05
RAB40AQ8WXH6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAB40AQ8WXH6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RAB40AQ8WXH6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAB40AQ8WXH6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAB40AQ8WXH6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RAB40AQ8WXH6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RAB40AQ8WXH6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB40AQ8WXH6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB40AQ8WXH6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB40AQ8WXH6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
RAB40AQ8WXH6 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.6■■□□□ 1.05
RAB40AQ8WXH6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.6■■□□□ 1.05
RAB40AQ8WXH6 DUSP8P4-201ENST00000399538 1761 ntBASIC21.6■■□□□ 1.05
RAB40AQ8WXH6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
RAB40AQ8WXH6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAB40AQ8WXH6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.59■■□□□ 1.05
RAB40AQ8WXH6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAB40AQ8WXH6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
RAB40AQ8WXH6 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAB40AQ8WXH6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
RAB40AQ8WXH6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RAB40AQ8WXH6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 1237.2 ms