Protein–RNA interactions for Protein: Q8TF05

PPP4R1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1Q8TF05 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PPP4R1Q8TF05 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PPP4R1Q8TF05 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
PPP4R1Q8TF05 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
PPP4R1Q8TF05 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
PPP4R1Q8TF05 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PPP4R1Q8TF05 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
PPP4R1Q8TF05 AC135983.2-203ENST00000454486 1613 ntBASIC24.79■■□□□ 1.56
PPP4R1Q8TF05 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.79■■□□□ 1.56
PPP4R1Q8TF05 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
PPP4R1Q8TF05 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PPP4R1Q8TF05 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
PPP4R1Q8TF05 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PPP4R1Q8TF05 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.78■■□□□ 1.56
PPP4R1Q8TF05 MIR6090-201ENST00000622481 60 ntBASIC24.78■■□□□ 1.56
PPP4R1Q8TF05 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PPP4R1Q8TF05 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
PPP4R1Q8TF05 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PPP4R1Q8TF05 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PPP4R1Q8TF05 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.77■■□□□ 1.56
PPP4R1Q8TF05 AC091060.1-201ENST00000623524 1766 ntBASIC24.77■■□□□ 1.56
PPP4R1Q8TF05 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.77■■□□□ 1.56
PPP4R1Q8TF05 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PPP4R1Q8TF05 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.76■■□□□ 1.55
PPP4R1Q8TF05 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.76■■□□□ 1.55
PPP4R1Q8TF05 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PPP4R1Q8TF05 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PPP4R1Q8TF05 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.75■■□□□ 1.55
PPP4R1Q8TF05 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PPP4R1Q8TF05 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PPP4R1Q8TF05 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.74■■□□□ 1.55
PPP4R1Q8TF05 DUX4L29-201ENST00000425409 679 ntBASIC24.74■■□□□ 1.55
PPP4R1Q8TF05 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.74■■□□□ 1.55
PPP4R1Q8TF05 WHAMMP2-203ENST00000563942 1603 ntBASIC24.74■■□□□ 1.55
PPP4R1Q8TF05 AC018358.1-201ENST00000631079 1402 ntBASIC24.73■■□□□ 1.55
PPP4R1Q8TF05 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.73■■□□□ 1.55
PPP4R1Q8TF05 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PPP4R1Q8TF05 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
PPP4R1Q8TF05 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PPP4R1Q8TF05 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PPP4R1Q8TF05 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
PPP4R1Q8TF05 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.71■■□□□ 1.55
PPP4R1Q8TF05 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.71■■□□□ 1.55
PPP4R1Q8TF05 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PPP4R1Q8TF05 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PPP4R1Q8TF05 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
PPP4R1Q8TF05 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PPP4R1Q8TF05 LINC00273-201ENST00000539813 1452 ntBASIC24.7■■□□□ 1.54
PPP4R1Q8TF05 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.69■■□□□ 1.54
PPP4R1Q8TF05 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PPP4R1Q8TF05 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.69■■□□□ 1.54
PPP4R1Q8TF05 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
PPP4R1Q8TF05 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PPP4R1Q8TF05 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PPP4R1Q8TF05 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
PPP4R1Q8TF05 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
PPP4R1Q8TF05 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
PPP4R1Q8TF05 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.68■■□□□ 1.54
PPP4R1Q8TF05 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
PPP4R1Q8TF05 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PPP4R1Q8TF05 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PPP4R1Q8TF05 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.67■■□□□ 1.54
PPP4R1Q8TF05 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PPP4R1Q8TF05 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
PPP4R1Q8TF05 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.67■■□□□ 1.54
PPP4R1Q8TF05 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PPP4R1Q8TF05 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.66■■□□□ 1.54
PPP4R1Q8TF05 AC145676.1-201ENST00000514988 2004 ntBASIC24.66■■□□□ 1.54
PPP4R1Q8TF05 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PPP4R1Q8TF05 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PPP4R1Q8TF05 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.66■■□□□ 1.54
PPP4R1Q8TF05 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
PPP4R1Q8TF05 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PPP4R1Q8TF05 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.65■■□□□ 1.54
PPP4R1Q8TF05 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PPP4R1Q8TF05 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PPP4R1Q8TF05 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PPP4R1Q8TF05 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
PPP4R1Q8TF05 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.64■■□□□ 1.54
PPP4R1Q8TF05 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.64■■□□□ 1.54
PPP4R1Q8TF05 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
PPP4R1Q8TF05 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PPP4R1Q8TF05 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PPP4R1Q8TF05 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PPP4R1Q8TF05 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PPP4R1Q8TF05 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.63■■□□□ 1.53
PPP4R1Q8TF05 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PPP4R1Q8TF05 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
PPP4R1Q8TF05 AC021231.2-201ENST00000594613 730 ntBASIC24.62■■□□□ 1.53
PPP4R1Q8TF05 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.62■■□□□ 1.53
PPP4R1Q8TF05 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PPP4R1Q8TF05 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
PPP4R1Q8TF05 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.6■■□□□ 1.53
PPP4R1Q8TF05 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PPP4R1Q8TF05 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
PPP4R1Q8TF05 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PPP4R1Q8TF05 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
PPP4R1Q8TF05 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.6■■□□□ 1.53
PPP4R1Q8TF05 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
PPP4R1Q8TF05 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms